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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036750 through 18771 annotations produced 1 hits



(CG6034):

Annotation Number : CG6034
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036750
Gbrowse : chr3L:17738472-17739912 (-) // 100.0 //
Probeset : 1633460_at
Accessions : protein= NP_649005;, nucleotide= NM_140748;
FlyMine data for FBgn0036750.
VDRC has 3 RNAi stocks for FBgn0036750 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain13 ± 11 of 4 1.10None
Head33 ± 44 of 4 2.60Up
Eye5 ± 10 of 4 0.44None
Thoracicoabdominal ganglion9 ± 20 of 4 0.70None
Salivary gland4 ± 00 of 4 0.33Down
Crop2 ± 10 of 4 0.20Down
Midgut10 ± 10 of 4 0.80None
Tubule3 ± 00 of 4 0.30Down
Hindgut9 ± 10 of 4 0.70None
Heart67 ± 74 of 4 5.30Up
Fat body11 ± 11 of 4 0.94None
Ovary3 ± 00 of 4 0.30Down
Testis9 ± 21 of 4 0.80None
Male accessory glands3 ± 10 of 4 0.30Down
Virgin spermatheca5 ± 10 of 4 0.39None
Mated spermatheca6 ± 20 of 4 0.47None
Adult carcass44 ± 34 of 4 3.50Up
Larval CNS2 ± 00 of 4 0.17Down
Larval Salivary gland5 ± 20 of 4 0.40None
Larval midgut5 ± 10 of 4 0.43None
Larval tubule4 ± 10 of 4 0.40Down
Larval hindgut5 ± 10 of 4 0.39None
Larval fat body8 ± 30 of 4 0.60None
Larval trachea2 ± 10 of 4 0.20Down
Larval carcass3 ± 10 of 4 0.31Down
S2 cells (growing)6 ± 10 of 4 0.49None
Whole fly12 ± 20 of 4

Looking for FBgn0036750. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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