FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036756 through 18771 annotations produced 1 hits

cln3 (cln3):

Annotation Number : CG5582
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036756
Gbrowse : chr3L:17802329-17807211 (-) // 100.0 //
Probeset : 1639653_at
Accessions : protein= NP_649011;, nucleotide= NM_140754;
Pathway : 0016020 // membrane // inferred from electronic annotation
FlyMine data for FBgn0036756.
BDGP gene expression has embryonic in situ data for CG5582: 4 pix of staining in 1 body parts.
Homophila reports that CG5582 is a close match (5e-68) to human gene BTS;CLN3 (NP_001035897), a gene associated with Ceroid-lipofuscinosis, neuronal-3, juvenile, 204200 (3).
TRiP has 1 RNAi stocks for FBgn0036756 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036756 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	25 ± 1	4 of 4	0.10	Down
Head	141 ± 5	4 of 4	0.80	None
Eye	308 ± 40	4 of 4	1.72	Up
Thoracicoabdominal ganglion	18 ± 1	4 of 4	0.10	Down
Salivary gland	39 ± 3	2 of 4	0.22	Down
Crop	10 ± 2	1 of 4	0.10	Down
Midgut	889 ± 37	4 of 4	5.00	Up
Tubule	1766 ± 60	4 of 4	9.90	Up
Hindgut	812 ± 24	4 of 4	4.50	Up
Heart	6 ± 1	1 of 4	0.03	Down
Fat body	11 ± 4	3 of 4	0.07	Down
Ovary	41 ± 2	4 of 4	0.20	Down
Testis	70 ± 4	4 of 4	0.40	Down
Male accessory glands	6 ± 1	0 of 4	0.00	Down
Virgin spermatheca	20 ± 0	3 of 4	0.12	Down
Mated spermatheca	28 ± 8	4 of 4	0.16	Down
Adult carcass	191 ± 11	4 of 4	1.10	None
Larval CNS	45 ± 11	4 of 4	0.25	Down
Larval Salivary gland	86 ± 21	4 of 4	0.48	Down
Larval midgut	275 ± 22	4 of 4	1.53	Up
Larval tubule	2121 ± 54	4 of 4	11.80	Up
Larval hindgut	124 ± 8	4 of 4	0.70	None
Larval fat body	3 ± 2	0 of 4	0.00	Down
Larval trachea	24 ± 7	4 of 4	0.14	Down
Larval carcass	124 ± 41	4 of 4	0.70	None
S2 cells (growing)	2 ± 1	0 of 4	0.01	Down
Whole fly	179 ± 24	4 of 4

Looking for FBgn0036756. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720