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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036757 through 18771 annotations produced 1 hits



CG14585 (Ir75a):

Annotation Number : CG14585
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036757
Gbrowse : chr3L:17808761-17811021 (-) // 100.0 //
Probeset : 1638785_at
Accessions : protein= NP_649012;, nucleotide= NM_140755;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004970 // ionotropic glutamate receptor activity // inferred from electronic annotation /// 0005234 // extracellular-gl
FlyMine data for FBgn0036757.
BioGrid reports that CG14585 interacts with CG7146 .
VDRC has 3 RNAi stocks for FBgn0036757 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.80None
Head20 ± 24 of 420.90Up
Eye15 ± 23 of 415.85Up
Thoracicoabdominal ganglion1 ± 00 of 4 1.30None
Salivary gland2 ± 00 of 4 2.33None
Crop0 ± 00 of 4 0.80None
Midgut1 ± 00 of 4 1.40None
Tubule1 ± 00 of 4 1.80Up
Hindgut1 ± 00 of 4 1.20None
Heart1 ± 10 of 4 1.60None
Fat body1 ± 10 of 4 1.68None
Ovary1 ± 00 of 4 1.40None
Testis6 ± 00 of 4 6.70Up
Male accessory glands1 ± 00 of 4 1.80None
Virgin spermatheca0 ± 00 of 4 0.88None
Mated spermatheca0 ± 00 of 4 0.60None
Adult carcass2 ± 00 of 4 2.20None
Larval CNS0 ± 00 of 4 0.70None
Larval Salivary gland0 ± 00 of 4 0.80None
Larval midgut1 ± 00 of 4 1.20None
Larval tubule2 ± 10 of 4 2.50None
Larval hindgut0 ± 00 of 4 0.80None
Larval fat body4 ± 10 of 4 4.60None
Larval trachea2 ± 20 of 4 2.92None
Larval carcass0 ± 00 of 4 0.95None
S2 cells (growing)1 ± 00 of 4 1.50None
Whole fly1 ± 00 of 4

Looking for FBgn0036757. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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