FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036759 through 18771 annotations produced 1 hits

(CG5577):

Annotation Number : CG5577
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036759
Gbrowse : chr3L:17832881-17834504 (-) // 100.0 //
Probeset : 1628682_at
Accessions : protein= NP_649014;, nucleotide= NM_140757;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0003869 // 4-nitrophenylphosphatase activity //
FlyMine data for FBgn0036759.
BDGP gene expression has embryonic in situ data for CG5577: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0036759 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	52 ± 1	4 of 4	0.40	Down
Head	235 ± 11	4 of 4	1.90	Up
Eye	172 ± 12	4 of 4	1.39	Up
Thoracicoabdominal ganglion	65 ± 2	4 of 4	0.50	Down
Salivary gland	467 ± 22	4 of 4	3.75	Up
Crop	314 ± 1	4 of 4	2.50	Up
Midgut	359 ± 6	4 of 4	2.90	Up
Tubule	884 ± 100	4 of 4	7.10	Up
Hindgut	354 ± 8	4 of 4	2.80	Up
Heart	512 ± 22	4 of 4	4.12	Up
Fat body	578 ± 30	4 of 4	4.64	Up
Ovary	11 ± 1	4 of 4	0.10	Down
Testis	17 ± 1	4 of 4	0.10	Down
Male accessory glands	213 ± 13	4 of 4	1.70	Up
Virgin spermatheca	700 ± 10	4 of 4	5.63	Up
Mated spermatheca	628 ± 21	4 of 4	5.04	Up
Adult carcass	459 ± 28	4 of 4	3.70	Up
Larval CNS	27 ± 3	4 of 4	0.22	Down
Larval Salivary gland	181 ± 14	4 of 4	1.45	Up
Larval midgut	302 ± 9	4 of 4	2.43	Up
Larval tubule	336 ± 3	4 of 4	2.70	Up
Larval hindgut	106 ± 4	4 of 4	0.86	None
Larval fat body	1309 ± 140	4 of 4	10.50	Up
Larval trachea	52 ± 5	4 of 4	0.42	Down
Larval carcass	73 ± 8	4 of 4	0.59	Down
S2 cells (growing)	28 ± 1	4 of 4	0.23	Down
Whole fly	124 ± 10	4 of 4

Looking for FBgn0036759. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720