Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036760 through 18771 annotations produced 1 hits



(CG5567):

Annotation Number : CG5567
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036760
Gbrowse : chr3L:17834634-17836642 (-) // 100.0 //
Probeset : 1637298_at
Accessions : protein= NP_649015;, nucleotide= NM_140758;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0003869 // 4-nitrophenylphosphatase activity //
FlyMine data for FBgn0036760.
BDGP gene expression has embryonic in situ data for CG5567: 4 pix of staining in 1 body parts.
TRiP has 2 RNAi stocks for FBgn0036760 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036760 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain217 ± 54 of 4 0.80None
Head260 ± 94 of 4 1.00None
Eye223 ± 74 of 4 0.87None
Thoracicoabdominal ganglion209 ± 94 of 4 0.80Down
Salivary gland306 ± 124 of 4 1.19Up
Crop609 ± 284 of 4 2.40Up
Midgut528 ± 204 of 4 2.10Up
Tubule993 ± 284 of 4 3.90Up
Hindgut419 ± 54 of 4 1.60Up
Heart588 ± 164 of 4 2.29Up
Fat body404 ± 264 of 4 1.57Up
Ovary335 ± 44 of 4 1.30Up
Testis167 ± 54 of 4 0.70Down
Male accessory glands94 ± 64 of 4 0.40Down
Virgin spermatheca549 ± 144 of 4 2.14Up
Mated spermatheca447 ± 384 of 4 1.74Up
Adult carcass381 ± 304 of 4 1.50Up
Larval CNS198 ± 284 of 4 0.77Down
Larval Salivary gland76 ± 34 of 4 0.30Down
Larval midgut138 ± 54 of 4 0.54Down
Larval tubule243 ± 104 of 4 0.90None
Larval hindgut171 ± 114 of 4 0.67Down
Larval fat body106 ± 34 of 4 0.40Down
Larval trachea153 ± 54 of 4 0.60Down
Larval carcass247 ± 324 of 4 0.96None
S2 cells (growing)82 ± 34 of 4 0.32Down
Whole fly257 ± 134 of 4

Looking for FBgn0036760. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime