Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036762 through 18771 annotations produced 1 hits



Pyruvate dehydrogenase E3 subunit /// (CG7430 /// DsimCG7430):

Annotation Number : CG7430
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036762
Gbrowse : chr3L:17840015-17842483 (+) // 100.0 //
Probeset : 1641291_at
Accessions : protein= NP_649017;, nucleotide= NM_140760;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct assay
Interpro : 0004148 // dihydrolipoyl dehydrogenase activity // inferred from sequence or structural similarity /// 0004148 // dihydr
FlyMine data for FBgn0036762.
BDGP gene expression has embryonic in situ data for CG7430: 14 pix of staining in 11 body parts.
Homophila reports that CG7430 is a close match (0) to human gene DLD;LAD;PHE3 (NP_000099), a gene associated with Leigh syndrome, 256000 (3);Maple syrup urine disease, type III, 248600 (3).
BioGrid reports that CG7430 interacts with CG7954 .
VDRC has 1 RNAi stocks for FBgn0036762 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain846 ± 434 of 4 1.20Up
Head801 ± 294 of 4 1.20Up
Eye796 ± 354 of 4 1.16None
Thoracicoabdominal ganglion1103 ± 174 of 4 1.60Up
Salivary gland1326 ± 494 of 4 1.93Up
Crop787 ± 304 of 4 1.10None
Midgut649 ± 134 of 4 0.90None
Tubule1818 ± 634 of 4 2.60Up
Hindgut1316 ± 74 of 4 1.90Up
Heart921 ± 364 of 4 1.34Up
Fat body958 ± 1044 of 4 1.39Up
Ovary497 ± 74 of 4 0.70Down
Testis711 ± 184 of 4 1.00None
Male accessory glands363 ± 44 of 4 0.50Down
Virgin spermatheca995 ± 334 of 4 1.45Up
Mated spermatheca909 ± 314 of 4 1.32Up
Adult carcass1533 ± 854 of 4 2.20Up
Larval CNS564 ± 494 of 4 0.82Down
Larval Salivary gland659 ± 384 of 4 0.96None
Larval midgut710 ± 394 of 4 1.03None
Larval tubule901 ± 754 of 4 1.30None
Larval hindgut1340 ± 614 of 4 1.95Up
Larval fat body425 ± 154 of 4 0.60Down
Larval trachea591 ± 384 of 4 0.86None
Larval carcass1283 ± 1054 of 4 1.87Up
S2 cells (growing)635 ± 224 of 4 0.92None
Whole fly687 ± 354 of 4

Looking for FBgn0036762. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime