FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036782 through 18771 annotations produced 1 hits

(CG7320):

Annotation Number : CG7320
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036782
Gbrowse : chr3L:18194938-18196666 (+) // 100.0 //
Probeset : 1627563_at
Accessions : protein= NP_649034;, nucleotide= NM_140777;
Interpro : 0005344 // oxygen transporter activity // inferred from electronic annotation
FlyMine data for FBgn0036782.
VDRC has 1 RNAi stocks for FBgn0036782 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.40	None
Head	4 ± 1	0 of 4	1.30	None
Eye	2 ± 1	0 of 4	0.75	None
Thoracicoabdominal ganglion	5 ± 2	0 of 4	1.50	None
Salivary gland	5 ± 2	0 of 4	1.64	None
Crop	4 ± 1	0 of 4	1.30	None
Midgut	7 ± 2	0 of 4	2.10	None
Tubule	4 ± 0	0 of 4	1.30	None
Hindgut	5 ± 0	0 of 4	1.50	None
Heart	1 ± 1	0 of 4	0.56	None
Fat body	1 ± 1	0 of 4	0.49	None
Ovary	2 ± 0	0 of 4	0.50	None
Testis	2 ± 0	0 of 4	0.70	None
Male accessory glands	9 ± 3	0 of 4	2.60	None
Virgin spermatheca	7 ± 2	0 of 4	1.96	None
Mated spermatheca	3 ± 0	0 of 4	0.84	None
Adult carcass	4 ± 2	0 of 4	1.20	None
Larval CNS	1 ± 1	0 of 4	0.45	None
Larval Salivary gland	22 ± 2	4 of 4	6.40	Up
Larval midgut	9 ± 1	1 of 4	2.56	Up
Larval tubule	7 ± 0	1 of 4	2.00	Up
Larval hindgut	15 ± 2	4 of 4	4.40	Up
Larval fat body	1122 ± 135	4 of 4	316.20	Up
Larval trachea	9 ± 11	2 of 4	2.73	None
Larval carcass	8 ± 1	1 of 4	2.29	Up
S2 cells (growing)	1 ± 1	0 of 4	0.54	None
Whole fly	3 ± 0	0 of 4

Looking for FBgn0036782. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720