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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036784 through 18771 annotations produced 1 hits



(CG5103):

Annotation Number : CG5103
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036784
Gbrowse : chr3L:18285224-18287467 (-) // 99.63 //
Probeset : 1639179_at
Accessions : protein= NP_649036;, nucleotide= NM_140779;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004802 // transketolase activity // inferred f
FlyMine data for FBgn0036784.
BioGrid reports that CG5103 interacts with CG8417 .
TRiP has 1 RNAi stocks for FBgn0036784 available for purchase.
VDRC has 6 RNAi stocks for FBgn0036784 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.10Down
Head2 ± 10 of 4 0.00Down
Eye3 ± 10 of 4 0.07Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.00Down
Salivary gland4 ± 00 of 4 0.07Down
Crop4 ± 30 of 4 0.10Down
Midgut1 ± 00 of 4 0.00Down
Tubule4 ± 00 of 4 0.10Down
Hindgut4 ± 10 of 4 0.10Down
Heart2 ± 00 of 4 0.04Down
Fat body3 ± 20 of 4 0.07Down
Ovary1 ± 00 of 4 0.00Down
Testis573 ± 114 of 410.20Up
Male accessory glands5 ± 10 of 4 0.10Down
Virgin spermatheca6 ± 20 of 4 0.11Down
Mated spermatheca4 ± 20 of 4 0.08Down
Adult carcass4 ± 20 of 4 0.10Down
Larval CNS1 ± 00 of 4 0.02Down
Larval Salivary gland2 ± 00 of 4 0.04Down
Larval midgut2 ± 10 of 4 0.05Down
Larval tubule4 ± 20 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.03Down
Larval fat body61 ± 321 of 4 1.10None
Larval trachea1 ± 00 of 4 0.03Down
Larval carcass2 ± 00 of 4 0.04Down
S2 cells (growing)2 ± 00 of 4 0.04Down
Whole fly56 ± 24 of 4

Looking for FBgn0036784. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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