FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036821 through 18771 annotations produced 1 hits

(CG3961):

Annotation Number : CG3961
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036821
Gbrowse : chr3L:18871353-18883582 (-) // 100.0 //
Probeset : 1637109_s_at
Accessions : protein= NP_649067; /// NP_730369; /// NP_730370;, nucleotide= NM_140810; /// NM_168781; /// NM_168782;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004467 // long-chain fatty acid-CoA ligase act
FlyMine data for FBgn0036821.
BDGP gene expression has embryonic in situ data for CG3961: 28 pix of staining in 6 body parts.
Homophila reports that CG3961 is a close match (3e-81) to human gene ACS4;ACSL4;FACL4;MRX63 (NP_004449), a gene associated with Mental retardation, X-linked nonspecific, 63, 300387 (3).
VDRC has 3 RNAi stocks for FBgn0036821 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	274 ± 17	4 of 4	0.80	Down
Head	1238 ± 76	4 of 4	3.80	Up
Eye	1010 ± 40	4 of 4	3.07	Up
Thoracicoabdominal ganglion	613 ± 20	4 of 4	1.90	Up
Salivary gland	30 ± 2	4 of 4	0.09	Down
Crop	1069 ± 32	4 of 4	3.20	Up
Midgut	205 ± 10	4 of 4	0.60	Down
Tubule	233 ± 18	4 of 4	0.70	Down
Hindgut	57 ± 3	4 of 4	0.20	Down
Heart	1223 ± 113	4 of 4	3.72	Up
Fat body	516 ± 244	4 of 4	1.57	None
Ovary	29 ± 5	4 of 4	0.10	Down
Testis	8 ± 1	4 of 4	0.00	Down
Male accessory glands	14 ± 2	1 of 4	0.00	Down
Virgin spermatheca	139 ± 18	4 of 4	0.42	Down
Mated spermatheca	219 ± 19	4 of 4	0.67	Down
Adult carcass	1039 ± 29	4 of 4	3.20	Up
Larval CNS	127 ± 21	4 of 4	0.39	Down
Larval Salivary gland	57 ± 5	4 of 4	0.17	Down
Larval midgut	122 ± 21	4 of 4	0.37	Down
Larval tubule	589 ± 12	4 of 4	1.80	Up
Larval hindgut	102 ± 11	4 of 4	0.31	Down
Larval fat body	2798 ± 233	4 of 4	8.50	Up
Larval trachea	45 ± 20	4 of 4	0.14	Down
Larval carcass	445 ± 64	4 of 4	1.35	None
S2 cells (growing)	1201 ± 24	4 of 4	3.65	Up
Whole fly	329 ± 21	4 of 4

Looking for FBgn0036821. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720