Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036825 through 18771 annotations produced 1 hits



Ribosomal protein L26 (RpL26):

Annotation Number : CG6846
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036825
Gbrowse : chr3L:18892173-18893024 (+) // 100.0 //
Probeset : 1628603_at
Accessions : protein= NP_649070;, nucleotide= NM_140813;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0036825.
BDGP gene expression has embryonic in situ data for CG6846: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0036825 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2976 ± 354 of 4 0.70Down
Head4750 ± 1494 of 4 1.20Up
Eye5912 ± 1234 of 4 1.44Up
Thoracicoabdominal ganglion3916 ± 984 of 4 1.00None
Salivary gland9350 ± 2804 of 4 2.28Up
Crop5854 ± 2884 of 4 1.40Up
Midgut5037 ± 544 of 4 1.20Up
Tubule4558 ± 834 of 4 1.10Up
Hindgut5216 ± 1144 of 4 1.30Up
Heart7140 ± 5514 of 4 1.74Up
Fat body6213 ± 7174 of 4 1.51Up
Ovary3555 ± 374 of 4 0.90None
Testis1058 ± 204 of 4 0.30Down
Male accessory glands8468 ± 2864 of 4 2.10Up
Virgin spermatheca5228 ± 2674 of 4 1.27Up
Mated spermatheca5327 ± 1134 of 4 1.30Up
Adult carcass5682 ± 1574 of 4 1.40Up
Larval CNS3080 ± 2044 of 4 0.75Down
Larval Salivary gland8130 ± 3164 of 4 1.98Up
Larval midgut4316 ± 1154 of 4 1.05None
Larval tubule4730 ± 1174 of 4 1.20Up
Larval hindgut4684 ± 444 of 4 1.14None
Larval fat body8300 ± 9514 of 4 2.00Up
Larval trachea6795 ± 694 of 4 1.65Up
Larval carcass5085 ± 3524 of 4 1.24None
S2 cells (growing)4913 ± 694 of 4 1.20Up
Whole fly4108 ± 1914 of 4

Looking for FBgn0036825. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime