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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036836 through 18771 annotations produced 1 hits



(CG11619):

Annotation Number : CG11619
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036836
Gbrowse : chr3L:18979158-18981258 (-) // 100.0 //
Probeset : 1629846_at
Accessions : protein= NP_649081;, nucleotide= NM_140824;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004629 // phospholipase C activity // inferred
FlyMine data for FBgn0036836.
VDRC has 2 RNAi stocks for FBgn0036836 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain17 ± 14 of 4 1.60None
Head10 ± 00 of 4 1.00None
Eye9 ± 02 of 4 0.87None
Thoracicoabdominal ganglion14 ± 14 of 4 1.30None
Salivary gland16 ± 31 of 4 1.58None
Crop12 ± 11 of 4 1.20None
Midgut13 ± 32 of 4 1.30None
Tubule11 ± 11 of 4 1.10None
Hindgut8 ± 10 of 4 0.80None
Heart7 ± 20 of 4 0.72None
Fat body18 ± 60 of 4 1.80None
Ovary4 ± 11 of 4 0.50None
Testis35 ± 24 of 4 3.40Up
Male accessory glands47 ± 04 of 4 4.50Up
Virgin spermatheca17 ± 14 of 4 1.67None
Mated spermatheca13 ± 21 of 4 1.25None
Adult carcass21 ± 50 of 4 2.10None
Larval CNS6 ± 11 of 4 0.65None
Larval Salivary gland15 ± 22 of 4 1.50None
Larval midgut15 ± 10 of 4 1.48None
Larval tubule10 ± 13 of 4 1.00None
Larval hindgut9 ± 11 of 4 0.87None
Larval fat body31 ± 24 of 4 3.00Up
Larval trachea4 ± 30 of 4 0.40None
Larval carcass12 ± 21 of 4 1.20None
S2 cells (growing)9 ± 20 of 4 0.88None
Whole fly10 ± 32 of 4

Looking for FBgn0036836. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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