Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036848 through 18771 annotations produced 1 hits



(CG10424):

Annotation Number : CG10424
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036848
Gbrowse : chr3L:19089492-19090812 (-) // 100.0 //
Probeset : 1631127_at
Accessions : protein= NP_649090;, nucleotide= NM_140833;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036848.
BDGP gene expression has embryonic in situ data for CG10424: 4 pix of staining in 1 body parts.
BioGrid reports that CG10424 interacts with CG11183 .
VDRC has 1 RNAi stocks for FBgn0036848 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain61 ± 44 of 4 0.60Down
Head102 ± 34 of 4 1.10None
Eye105 ± 24 of 4 1.10None
Thoracicoabdominal ganglion49 ± 34 of 4 0.50Down
Salivary gland98 ± 144 of 4 1.03None
Crop123 ± 54 of 4 1.30None
Midgut83 ± 54 of 4 0.90None
Tubule121 ± 54 of 4 1.30Up
Hindgut101 ± 24 of 4 1.10None
Heart335 ± 234 of 4 3.51Up
Fat body202 ± 394 of 4 2.11Up
Ovary144 ± 24 of 4 1.50Up
Testis45 ± 14 of 4 0.50Down
Male accessory glands119 ± 94 of 4 1.20None
Virgin spermatheca204 ± 144 of 4 2.14Up
Mated spermatheca210 ± 144 of 4 2.20Up
Adult carcass166 ± 134 of 4 1.70Up
Larval CNS117 ± 84 of 4 1.22None
Larval Salivary gland191 ± 54 of 4 2.00Up
Larval midgut103 ± 24 of 4 1.08None
Larval tubule249 ± 24 of 4 2.60Up
Larval hindgut108 ± 124 of 4 1.13None
Larval fat body708 ± 924 of 4 7.40Up
Larval trachea324 ± 154 of 4 3.39Up
Larval carcass156 ± 64 of 4 1.63Up
S2 cells (growing)277 ± 74 of 4 2.90Up
Whole fly95 ± 94 of 4

Looking for FBgn0036848. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime