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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036851 through 18771 annotations produced 2 hits



(CG14082):

Annotation Number : S.C3L002404
Flybase ID : FBgn0036851
Gbrowse : chr3L:19101175-19120668 (-) // 100.0 //
Probeset : 1633726_s_at
Accessions : protein= NP_001137970; /// NP_649093;, nucleotide= NM_001144498; /// NM_140836;
FlyMine data for FBgn0036851.
VDRC has 1 RNAi stocks for FBgn0036851 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 10 of 4 5.70None
Head5 10 of 4 2.50None
Eye4 10 of 4 2.37None
Thoracicoabdominal ganglion2 00 of 4 1.10None
Salivary gland11 60 of 4 5.63None
Crop2 00 of 4 1.30None
Midgut1 00 of 4 0.80None
Tubule2 00 of 4 1.10Up
Hindgut5 10 of 4 2.50None
Heart3 10 of 4 1.78None
Fat body4 10 of 4 2.14None
Ovary4 10 of 4 2.10None
Testis0 00 of 4 0.40None
Male accessory glands4 10 of 4 2.10None
Virgin spermatheca2 00 of 4 1.04None
Mated spermatheca2 00 of 4 1.09None
Adult carcass6 20 of 4 3.30None
Larval CNS2 20 of 4 1.33None
Larval Salivary gland7 00 of 4 3.88Up
Larval midgut3 00 of 4 1.72None
Larval tubule1 00 of 4 0.90None
Larval hindgut7 10 of 4 3.67None
Larval fat body3 10 of 4 1.70None
Larval trachea4 40 of 4 2.31None
Larval carcass3 00 of 4 1.56None
S2 cells (growing)5 10 of 4 2.62None
Whole fly2 00 of 4



(CG14082):

Annotation Number : CG14082
Flybase ID : FBgn0036851
Gbrowse : chr3L:19100374-19103498 (-) // 100.0 //
Probeset : 1630284_at
Accessions : protein= NP_001137970; /// NP_649093;, nucleotide= NM_001144498; /// NM_140836;
FlyMine data for FBgn0036851.
VDRC has 1 RNAi stocks for FBgn0036851 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 00 of 4 1.50None
Head2 00 of 4 1.00None
Eye1 00 of 4 0.52None
Thoracicoabdominal ganglion1 00 of 4 0.50None
Salivary gland7 30 of 4 2.54None
Crop2 10 of 4 0.90None
Midgut14 20 of 4 5.00Up
Tubule2 00 of 4 0.70None
Hindgut2 00 of 4 0.70None
Heart1 00 of 4 0.37None
Fat body4 30 of 4 1.65None
Ovary2 00 of 4 0.80None
Testis3 20 of 4 1.20None
Male accessory glands4 10 of 4 1.40None
Virgin spermatheca11 30 of 4 3.91None
Mated spermatheca6 20 of 4 2.15None
Adult carcass3 10 of 4 1.30None
Larval CNS0 00 of 4 0.27None
Larval Salivary gland2 00 of 4 0.83None
Larval midgut10 10 of 4 3.74Up
Larval tubule1 00 of 4 0.50None
Larval hindgut2 10 of 4 0.74None
Larval fat body1 00 of 4 0.60None
Larval trachea1 00 of 4 0.39None
Larval carcass5 20 of 4 1.76None
S2 cells (growing)7 10 of 4 2.39None
Whole fly2 10 of 4

Looking for FBgn0036851. 2 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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