Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036862 through 18771 annotations produced 1 hits



chr3L:19274463-19281669 (-) // 100.0 // ():

Annotation Number : CG9619
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1629811_at
Accessions : protein= , nucleotide= NP_649104;
FlyMine data for full length.
Homophila reports that CG9619 is a close match (2e-16) to human gene PPP1R3A;PPP1R3 (NP_002702), a gene associated with Insulin resistance, severe, digenic, 604367 (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain173 ± 84 of 4 4.40Up
Head51 ± 34 of 4 1.30None
Eye26 ± 24 of 4 0.67None
Thoracicoabdominal ganglion120 ± 74 of 4 3.00Up
Salivary gland17 ± 21 of 4 0.43Down
Crop33 ± 54 of 4 0.90None
Midgut3 ± 10 of 4 0.10Down
Tubule3 ± 00 of 4 0.10Down
Hindgut11 ± 04 of 4 0.30Down
Heart20 ± 34 of 4 0.52None
Fat body38 ± 84 of 4 0.98None
Ovary1 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands4 ± 10 of 4 0.10Down
Virgin spermatheca19 ± 14 of 4 0.49None
Mated spermatheca21 ± 44 of 4 0.54None
Adult carcass108 ± 74 of 4 2.70Up
Larval CNS555 ± 924 of 413.98Up
Larval Salivary gland11 ± 33 of 4 0.28Down
Larval midgut2 ± 01 of 4 0.06Down
Larval tubule7 ± 01 of 4 0.20Down
Larval hindgut35 ± 44 of 4 0.89None
Larval fat body40 ± 24 of 4 1.00None
Larval trachea7 ± 24 of 4 0.19Down
Larval carcass248 ± 464 of 4 6.26Up
S2 cells (growing)8 ± 14 of 4 0.22Down
Whole fly39 ± 74 of 4

Looking for FBgn0036862. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime