FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036875 through 18771 annotations produced 2 hits

(CG9449):

Annotation Number : CG9449
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036875
Gbrowse : chr3L:19486535-19489801 (-) // 100.0 //
Probeset : 1628150_a_at
Accessions : protein= NP_001137975; /// NP_001137976; /// NP_001137977;, nucleotide= NM_001144503; /// NM_001144504; /// NM_001144505;
Pathway : engulfment // inferred from mutant phenotype"
FlyMine data for FBgn0036875.
BDGP gene expression has embryonic in situ data for CG9449: 17 pix of staining in 3 body parts.
VDRC has 3 RNAi stocks for FBgn0036875 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	1 of 4	0.20	Down
Head	92 ± 3	4 of 4	2.70	Up
Eye	36 ± 3	4 of 4	1.07	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.10	Down
Salivary gland	157 ± 4	4 of 4	4.64	Up
Crop	5 ± 1	1 of 4	0.20	Down
Midgut	4 ± 2	0 of 4	0.10	Down
Tubule	46 ± 16	3 of 4	1.40	None
Hindgut	12 ± 2	2 of 4	0.40	Down
Heart	116 ± 16	4 of 4	3.45	Up
Fat body	101 ± 27	4 of 4	2.99	Up
Ovary	8 ± 0	4 of 4	0.30	Down
Testis	113 ± 4	4 of 4	3.40	Up
Male accessory glands	4 ± 1	0 of 4	0.10	Down
Virgin spermatheca	31 ± 3	4 of 4	0.92	None
Mated spermatheca	24 ± 3	4 of 4	0.73	None
Adult carcass	127 ± 15	4 of 4	3.80	Up
Larval CNS	4 ± 0	0 of 4	0.12	Down
Larval Salivary gland	247 ± 29	4 of 4	7.30	Up
Larval midgut	4 ± 1	0 of 4	0.14	Down
Larval tubule	857 ± 25	4 of 4	25.30	Up
Larval hindgut	35 ± 2	4 of 4	1.06	None
Larval fat body	941 ± 92	4 of 4	27.80	Up
Larval trachea	353 ± 78	4 of 4	10.43	Up
Larval carcass	457 ± 39	4 of 4	13.51	Up
S2 cells (growing)	1 ± 0	0 of 4	0.03	Down
Whole fly	33 ± 2	4 of 4

(CG9449):

Annotation Number : CG9449
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036875
Gbrowse : chr3L:19485515-19489791 (-) // 100.0 //
Probeset : 1633200_at
Accessions : protein= NP_001137975; /// NP_001137976; /// NP_001137977;, nucleotide= NM_001144503; /// NM_001144504; /// NM_001144505;
Pathway : engulfment // inferred from mutant phenotype"
FlyMine data for FBgn0036875.
BDGP gene expression has embryonic in situ data for CG9449: 17 pix of staining in 3 body parts.
VDRC has 3 RNAi stocks for FBgn0036875 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	10 ± 1	4 of 4	0.10	Down
Head	219 ± 12	4 of 4	2.90	Up
Eye	108 ± 8	4 of 4	1.41	Up
Thoracicoabdominal ganglion	11 ± 1	4 of 4	0.10	Down
Salivary gland	451 ± 22	4 of 4	5.86	Up
Crop	8 ± 1	3 of 4	0.10	Down
Midgut	9 ± 1	0 of 4	0.10	Down
Tubule	132 ± 52	4 of 4	1.70	None
Hindgut	22 ± 2	4 of 4	0.30	Down
Heart	219 ± 17	4 of 4	2.85	Up
Fat body	256 ± 46	4 of 4	3.33	Up
Ovary	23 ± 5	4 of 4	0.30	Down
Testis	254 ± 5	4 of 4	3.30	Up
Male accessory glands	3 ± 1	0 of 4	0.00	Down
Virgin spermatheca	195 ± 24	4 of 4	2.54	Up
Mated spermatheca	162 ± 18	4 of 4	2.10	Up
Adult carcass	227 ± 16	4 of 4	3.00	Up
Larval CNS	9 ± 2	4 of 4	0.12	Down
Larval Salivary gland	671 ± 17	4 of 4	8.73	Up
Larval midgut	25 ± 1	4 of 4	0.33	Down
Larval tubule	1480 ± 36	4 of 4	19.20	Up
Larval hindgut	99 ± 9	4 of 4	1.29	None
Larval fat body	1618 ± 151	4 of 4	21.00	Up
Larval trachea	747 ± 200	4 of 4	9.71	Up
Larval carcass	1011 ± 73	4 of 4	13.14	Up
S2 cells (growing)	5 ± 1	1 of 4	0.07	Down
Whole fly	77 ± 2	4 of 4

Looking for FBgn0036875. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720