Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036897 through 18771 annotations produced 1 hits



(CG8786):

Annotation Number : CG8786
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036897
Gbrowse : chr3L:19630864-19635914 (-) // 100.0 //
Probeset : 1639950_at
Accessions : protein= NP_001137978; /// NP_001137979; /// NP_001137980; /// NP_649138;, nucleotide= NM_001144506; /// NM_001144507; /// NM_001144508; /// NM_140881;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0036897.
TRiP has 1 RNAi stocks for FBgn0036897 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036897 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain202 64 of 4 1.70Up
Head99 44 of 4 0.80Down
Eye155 54 of 4 1.32Up
Thoracicoabdominal ganglion191 34 of 4 1.60Up
Salivary gland141 124 of 4 1.20None
Crop82 34 of 4 0.70Down
Midgut58 24 of 4 0.50Down
Tubule85 24 of 4 0.70Down
Hindgut66 34 of 4 0.60Down
Heart62 24 of 4 0.53Down
Fat body52 14 of 4 0.44Down
Ovary310 44 of 4 2.60Up
Testis11 04 of 4 0.10Down
Male accessory glands114 74 of 4 1.00None
Virgin spermatheca88 84 of 4 0.75Down
Mated spermatheca113 94 of 4 0.97None
Adult carcass43 24 of 4 0.40Down
Larval CNS171 134 of 4 1.46Up
Larval Salivary gland155 64 of 4 1.32Up
Larval midgut60 64 of 4 0.51Down
Larval tubule142 54 of 4 1.20Up
Larval hindgut79 44 of 4 0.68Down
Larval fat body71 34 of 4 0.60Down
Larval trachea184 134 of 4 1.57Up
Larval carcass106 74 of 4 0.91None
S2 cells (growing)112 34 of 4 0.96None
Whole fly117 44 of 4

Looking for FBgn0036897. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime