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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036922 through 18771 annotations produced 1 hits



(CG14182):

Annotation Number : CG14182
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036922
Gbrowse : chr3L:19972287-19972862 (-) // 100.0 //
Probeset : 1625177_at
Accessions : protein= NP_649163;, nucleotide= NM_140906;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036922.
BioGrid reports that CG14182 interacts with CG5094 .
VDRC has 2 RNAi stocks for FBgn0036922 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain109 34 of 4 2.20Up
Head48 34 of 4 1.00None
Eye57 54 of 4 1.14None
Thoracicoabdominal ganglion66 44 of 4 1.30Up
Salivary gland65 34 of 4 1.30Up
Crop57 34 of 4 1.10None
Midgut22 34 of 4 0.40Down
Tubule12 10 of 4 0.20Down
Hindgut50 24 of 4 1.00None
Heart46 44 of 4 0.92None
Fat body44 44 of 4 0.88None
Ovary112 44 of 4 2.20Up
Testis14 13 of 4 0.30Down
Male accessory glands42 54 of 4 0.80None
Virgin spermatheca22 14 of 4 0.45Down
Mated spermatheca18 12 of 4 0.36Down
Adult carcass30 32 of 4 0.60Down
Larval CNS56 24 of 4 1.11None
Larval Salivary gland64 24 of 4 1.27Up
Larval midgut16 02 of 4 0.32Down
Larval tubule38 14 of 4 0.80Down
Larval hindgut38 24 of 4 0.76Down
Larval fat body55 64 of 4 1.10None
Larval trachea65 84 of 4 1.30Up
Larval carcass35 44 of 4 0.71Down
S2 cells (growing)55 34 of 4 1.11None
Whole fly50 24 of 4

Looking for FBgn0036922. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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