FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036926 through 18771 annotations produced 2 hits

(CG7646):

Annotation Number : CG7646
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036926
Gbrowse : chr3L:19987724-19989012 (+) // 100.0 //
Probeset : 1637457_at
Accessions : protein= NP_649167; /// NP_788542;, nucleotide= NM_140910; /// NM_176364;
Interpro : 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding //
FlyMine data for FBgn0036926.
BDGP gene expression has embryonic in situ data for CG7646: 4 pix of staining in 1 body parts.
Homophila reports that CG7646 is a close match (3e-28) to human gene GCAP;GUCA1A (NP_000400), a gene associated with Cone dystrophy-3, 602093 (3).
VDRC has 3 RNAi stocks for FBgn0036926 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1094 ± 16	4 of 4	23.50	Up
Head	367 ± 13	4 of 4	7.90	Up
Eye	106 ± 10	4 of 4	2.28	Up
Thoracicoabdominal ganglion	800 ± 11	4 of 4	17.20	Up
Salivary gland	34 ± 7	0 of 4	0.75	None
Crop	61 ± 1	4 of 4	1.30	Up
Midgut	19 ± 1	3 of 4	0.40	Down
Tubule	27 ± 1	3 of 4	0.60	Down
Hindgut	39 ± 6	4 of 4	0.80	None
Heart	24 ± 3	4 of 4	0.53	Down
Fat body	53 ± 19	4 of 4	1.15	None
Ovary	16 ± 1	4 of 4	0.40	Down
Testis	8 ± 1	0 of 4	0.20	Down
Male accessory glands	17 ± 5	1 of 4	0.40	Down
Virgin spermatheca	69 ± 5	4 of 4	1.50	Up
Mated spermatheca	77 ± 23	4 of 4	1.66	None
Adult carcass	41 ± 5	3 of 4	0.90	None
Larval CNS	746 ± 32	4 of 4	16.01	Up
Larval Salivary gland	28 ± 1	4 of 4	0.60	Down
Larval midgut	20 ± 2	3 of 4	0.44	Down
Larval tubule	25 ± 2	2 of 4	0.50	Down
Larval hindgut	39 ± 1	4 of 4	0.85	None
Larval fat body	34 ± 2	0 of 4	0.70	None
Larval trachea	27 ± 2	4 of 4	0.58	Down
Larval carcass	73 ± 8	4 of 4	1.57	Up
S2 cells (growing)	38 ± 3	4 of 4	0.83	None
Whole fly	46 ± 4	4 of 4

(CG7646):

Annotation Number : CG7646
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036926
Gbrowse : chr3L:19985015-19989012 (+) // 100.0 //
Probeset : 1627218_a_at
Accessions : protein= NP_649167; /// NP_788542;, nucleotide= NM_140910; /// NM_176364;
Interpro : 0005509 // calcium ion binding // inferred from sequence or structural similarity /// 0005509 // calcium ion binding //
FlyMine data for FBgn0036926.
BDGP gene expression has embryonic in situ data for CG7646: 4 pix of staining in 1 body parts.
Homophila reports that CG7646 is a close match (3e-28) to human gene GCAP;GUCA1A (NP_000400), a gene associated with Cone dystrophy-3, 602093 (3).
VDRC has 3 RNAi stocks for FBgn0036926 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1251 ± 23	4 of 4	18.20	Up
Head	480 ± 36	4 of 4	7.00	Up
Eye	180 ± 8	4 of 4	2.63	Up
Thoracicoabdominal ganglion	974 ± 25	4 of 4	14.20	Up
Salivary gland	20 ± 0	3 of 4	0.30	Down
Crop	115 ± 3	4 of 4	1.70	Up
Midgut	18 ± 1	4 of 4	0.30	Down
Tubule	21 ± 0	4 of 4	0.30	Down
Hindgut	52 ± 0	4 of 4	0.80	None
Heart	91 ± 8	4 of 4	1.34	None
Fat body	26 ± 4	4 of 4	0.38	Down
Ovary	27 ± 0	4 of 4	0.40	Down
Testis	11 ± 0	4 of 4	0.20	Down
Male accessory glands	24 ± 0	4 of 4	0.40	Down
Virgin spermatheca	36 ± 2	4 of 4	0.53	Down
Mated spermatheca	45 ± 1	4 of 4	0.67	None
Adult carcass	55 ± 4	4 of 4	0.80	None
Larval CNS	995 ± 103	4 of 4	14.50	Up
Larval Salivary gland	30 ± 1	4 of 4	0.44	Down
Larval midgut	29 ± 0	4 of 4	0.43	Down
Larval tubule	20 ± 1	4 of 4	0.30	Down
Larval hindgut	59 ± 0	4 of 4	0.86	None
Larval fat body	24 ± 2	4 of 4	0.30	Down
Larval trachea	62 ± 7	4 of 4	0.91	None
Larval carcass	89 ± 7	4 of 4	1.30	None
S2 cells (growing)	33 ± 1	4 of 4	0.49	Down
Whole fly	68 ± 7	4 of 4

Looking for FBgn0036926. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720