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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036934 through 18771 annotations produced 1 hits



neuropeptide-Y-receptor (sNPF-R):

Annotation Number : CG7395
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036934
Gbrowse : chr3L:20053095-20082082 (-) // 100.0 //
Probeset : 1624199_at
Accessions : protein= NP_524176;, nucleotide= NM_079452;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0036934.
BDGP gene expression has embryonic in situ data for NPFR76F: 12 pix of staining in 3 body parts.
Homophila reports that CG7395 is a close match (4e-11) to human gene DRD3;ETM1;FET1 (NP_387512), a gene associated with {Essential tremor, susceptibility to}, 190300 (3);{Schizophrenia, susceptibility to}, 181500 (3).
TRiP has 1 RNAi stocks for FBgn0036934 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036934 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain313 74 of 423.30Up
Head82 54 of 4 6.10Up
Eye62 54 of 4 4.64Up
Thoracicoabdominal ganglion190 54 of 414.20Up
Salivary gland21 42 of 4 1.60None
Crop14 23 of 4 1.10None
Midgut16 31 of 4 1.20None
Tubule16 23 of 4 1.20None
Hindgut18 24 of 4 1.40None
Heart19 34 of 4 1.44None
Fat body19 74 of 4 1.44None
Ovary3 00 of 4 0.30Down
Testis5 12 of 4 0.40Down
Male accessory glands33 24 of 4 2.50Up
Virgin spermatheca54 104 of 4 4.08Up
Mated spermatheca72 174 of 4 5.41Up
Adult carcass18 13 of 4 1.30Up
Larval CNS93 34 of 4 6.96Up
Larval Salivary gland11 14 of 4 0.86None
Larval midgut13 13 of 4 0.99None
Larval tubule15 24 of 4 1.10None
Larval hindgut29 14 of 4 2.17Up
Larval fat body10 22 of 4 0.80None
Larval trachea5 33 of 4 0.40Down
Larval carcass55 24 of 4 4.12Up
S2 cells (growing)5 12 of 4 0.43Down
Whole fly13 04 of 4

Looking for FBgn0036934. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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