Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036935 through 18771 annotations produced 1 hits



(CG14186):

Annotation Number : CG14186
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036935
Gbrowse : chr3L:20091180-20096907 (-) // 100.0 //
Probeset : 1624772_at
Accessions : protein= NP_649174;, nucleotide= NM_140917;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036935.
BDGP gene expression has embryonic in situ data for CG14186: 15 pix of staining in 6 body parts.
BioGrid reports that CG14186 interacts with CG7675 CG8814 .
TRiP has 1 RNAi stocks for FBgn0036935 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036935 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1077 ± 354 of 427.30Up
Head317 ± 374 of 4 8.00Up
Eye329 ± 334 of 4 8.34Up
Thoracicoabdominal ganglion712 ± 224 of 418.10Up
Salivary gland18 ± 11 of 4 0.47Down
Crop6 ± 12 of 4 0.20Down
Midgut3 ± 10 of 4 0.10Down
Tubule4 ± 00 of 4 0.10Down
Hindgut25 ± 14 of 4 0.70Down
Heart4 ± 11 of 4 0.11Down
Fat body12 ± 62 of 4 0.32Down
Ovary1 ± 00 of 4 0.00Down
Testis2 ± 01 of 4 0.10Down
Male accessory glands2 ± 10 of 4 0.10Down
Virgin spermatheca5 ± 01 of 4 0.14Down
Mated spermatheca5 ± 11 of 4 0.13Down
Adult carcass17 ± 13 of 4 0.50Down
Larval CNS221 ± 164 of 4 5.60Up
Larval Salivary gland33 ± 44 of 4 0.84None
Larval midgut5 ± 01 of 4 0.14Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut8 ± 12 of 4 0.21Down
Larval fat body2 ± 00 of 4 0.10Down
Larval trachea11 ± 73 of 4 0.29Down
Larval carcass6 ± 12 of 4 0.16Down
S2 cells (growing)1 ± 00 of 4 0.04Down
Whole fly39 ± 24 of 4

Looking for FBgn0036935. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime