FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036940 through 18771 annotations produced 1 hits

CG7348 (obst-J):

Annotation Number : CG7348
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036940
Gbrowse : chr3L:20123542-20124837 (-) // 100.0 //
Probeset : 1638298_at
Accessions : protein= NP_649179;, nucleotide= NM_140922;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0008061 // chitin binding // inferred from electronic annotation /// 0008061 // chitin binding // inferred from reviewed
FlyMine data for FBgn0036940.
VDRC has 2 RNAi stocks for FBgn0036940 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.40	Down
Head	1 ± 1	0 of 4	0.20	Down
Eye	2 ± 1	0 of 4	0.31	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.10	Down
Salivary gland	7 ± 3	0 of 4	1.01	None
Crop	2 ± 1	0 of 4	0.30	None
Midgut	1 ± 0	0 of 4	0.20	Down
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	1 ± 0	0 of 4	0.10	Down
Heart	3 ± 0	0 of 4	0.44	Down
Fat body	1 ± 0	0 of 4	0.17	Down
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	33 ± 1	4 of 4	4.40	Up
Male accessory glands	3 ± 2	0 of 4	0.50	None
Virgin spermatheca	2 ± 0	0 of 4	0.27	Down
Mated spermatheca	2 ± 1	0 of 4	0.34	Down
Adult carcass	4 ± 2	0 of 4	0.60	None
Larval CNS	2 ± 0	0 of 4	0.29	Down
Larval Salivary gland	2 ± 0	0 of 4	0.26	Down
Larval midgut	1925 ± 61	4 of 4	259.25	Up
Larval tubule	4 ± 0	0 of 4	0.60	Down
Larval hindgut	3 ± 1	0 of 4	0.41	Down
Larval fat body	4 ± 2	1 of 4	0.70	None
Larval trachea	2 ± 2	0 of 4	0.38	Down
Larval carcass	1 ± 0	0 of 4	0.25	Down
S2 cells (growing)	2 ± 0	0 of 4	0.32	Down
Whole fly	7 ± 0	1 of 4

Looking for FBgn0036940. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720