FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036973 through 18771 annotations produced 2 hits

(CG5585):

Annotation Number : CG5585
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036973
Gbrowse : chr3L:20338830-20341039 (-) // 100.0 //
Probeset : 1627743_at
Accessions : protein= NP_649209;, nucleotide= NM_140952;
FlyMine data for FBgn0036973.
BDGP gene expression has embryonic in situ data for CG5585: 14 pix of staining in 12 body parts.
TRiP has 1 RNAi stocks for FBgn0036973 available for purchase.
VDRC has 3 RNAi stocks for FBgn0036973 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	55 ± 1	4 of 4	1.10	None
Head	32 ± 1	4 of 4	0.70	Down
Eye	28 ± 2	4 of 4	0.57	Down
Thoracicoabdominal ganglion	50 ± 2	4 of 4	1.00	None
Salivary gland	53 ± 6	4 of 4	1.06	None
Crop	39 ± 2	4 of 4	0.80	Down
Midgut	24 ± 1	4 of 4	0.50	Down
Tubule	59 ± 3	4 of 4	1.20	Up
Hindgut	39 ± 1	4 of 4	0.80	Down
Heart	27 ± 3	4 of 4	0.55	Down
Fat body	29 ± 7	4 of 4	0.59	Down
Ovary	74 ± 4	4 of 4	1.50	Up
Testis	148 ± 3	4 of 4	3.00	Up
Male accessory glands	36 ± 4	4 of 4	0.70	Down
Virgin spermatheca	48 ± 4	4 of 4	0.97	None
Mated spermatheca	59 ± 6	4 of 4	1.18	None
Adult carcass	30 ± 1	4 of 4	0.60	Down
Larval CNS	96 ± 9	4 of 4	1.92	Up
Larval Salivary gland	37 ± 5	4 of 4	0.75	None
Larval midgut	37 ± 3	4 of 4	0.75	Down
Larval tubule	42 ± 4	4 of 4	0.80	None
Larval hindgut	33 ± 2	4 of 4	0.66	Down
Larval fat body	52 ± 8	4 of 4	1.00	None
Larval trachea	41 ± 5	4 of 4	0.82	None
Larval carcass	30 ± 2	4 of 4	0.60	Down
S2 cells (growing)	43 ± 0	4 of 4	0.86	None
Whole fly	50 ± 2	4 of 4

/// (CG5585 /// CG6434):

Annotation Number : CG6434
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036972 /// FBgn0036973
Gbrowse : chr3L:20315476-20316309 (-) // 100.0 //
Probeset : 1626046_s_at
Accessions : protein= NP_649208; /// NP_649209;, nucleotide= NM_140951; /// NM_140952;
FlyMine data for FBgn0036972 /// FBgn0036973.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	40 ± 1	4 of 4	1.10	None
Head	22 ± 2	4 of 4	0.60	Down
Eye	24 ± 1	4 of 4	0.66	Down
Thoracicoabdominal ganglion	23 ± 2	4 of 4	0.60	Down
Salivary gland	20 ± 4	2 of 4	0.56	Down
Crop	35 ± 2	4 of 4	0.90	None
Midgut	21 ± 2	4 of 4	0.60	Down
Tubule	11 ± 1	2 of 4	0.30	Down
Hindgut	27 ± 0	4 of 4	0.70	Down
Heart	18 ± 2	4 of 4	0.50	Down
Fat body	18 ± 4	3 of 4	0.48	Down
Ovary	52 ± 1	4 of 4	1.40	Up
Testis	49 ± 2	4 of 4	1.30	Up
Male accessory glands	18 ± 3	0 of 4	0.50	Down
Virgin spermatheca	9 ± 0	1 of 4	0.26	Down
Mated spermatheca	5 ± 0	0 of 4	0.16	Down
Adult carcass	18 ± 2	3 of 4	0.50	Down
Larval CNS	60 ± 4	4 of 4	1.63	Up
Larval Salivary gland	23 ± 1	4 of 4	0.64	Down
Larval midgut	13 ± 0	2 of 4	0.35	Down
Larval tubule	35 ± 3	4 of 4	0.90	None
Larval hindgut	17 ± 1	4 of 4	0.48	Down
Larval fat body	40 ± 3	4 of 4	1.10	None
Larval trachea	42 ± 2	4 of 4	1.15	None
Larval carcass	17 ± 0	4 of 4	0.48	Down
S2 cells (growing)	41 ± 2	4 of 4	1.11	None
Whole fly	37 ± 2	4 of 4

Looking for FBgn0036973. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720