FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036984 through 18771 annotations produced 1 hits

(CG13248):

Annotation Number : CG13248
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036984
Gbrowse : chr3L:20400200-20403669 (-) // 100.0 //
Probeset : 1632238_at
Accessions : protein= NP_649219;, nucleotide= NM_140962;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0015171 // amino acid transmembrane transporter activity // inferred from sequence or structural similarity /// 0015171
FlyMine data for FBgn0036984.
BDGP gene expression has embryonic in situ data for CG13248: 13 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0036984 available for purchase.
VDRC has 1 RNAi stocks for FBgn0036984 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	556 ± 44	4 of 4	29.10	Up
Head	158 ± 17	4 of 4	8.30	Up
Eye	30 ± 1	4 of 4	1.59	Up
Thoracicoabdominal ganglion	384 ± 10	4 of 4	20.10	Up
Salivary gland	7 ± 0	0 of 4	0.39	Down
Crop	30 ± 2	4 of 4	1.60	Up
Midgut	11 ± 1	4 of 4	0.60	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	8 ± 0	4 of 4	0.40	Down
Heart	9 ± 1	3 of 4	0.47	Down
Fat body	7 ± 0	3 of 4	0.40	Down
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	0 ± 0	0 of 4	0.00	Down
Male accessory glands	10 ± 1	3 of 4	0.50	Down
Virgin spermatheca	3 ± 0	1 of 4	0.18	Down
Mated spermatheca	6 ± 1	1 of 4	0.31	Down
Adult carcass	9 ± 1	0 of 4	0.50	Down
Larval CNS	423 ± 20	4 of 4	22.12	Up
Larval Salivary gland	4 ± 0	1 of 4	0.23	Down
Larval midgut	15 ± 1	4 of 4	0.81	None
Larval tubule	1 ± 0	0 of 4	0.10	Down
Larval hindgut	13 ± 1	4 of 4	0.70	Down
Larval fat body	1 ± 0	0 of 4	0.10	Down
Larval trachea	4 ± 2	3 of 4	0.26	Down
Larval carcass	8 ± 0	4 of 4	0.47	Down
S2 cells (growing)	58 ± 3	4 of 4	3.07	Up
Whole fly	19 ± 1	4 of 4

Looking for FBgn0036984. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720