Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0036990 through 18771 annotations produced 1 hits



mitochondrial ribosomal protein L15 (mRpL15):

Annotation Number : CG5219
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036990
Gbrowse : chr3L:20428209-20429271 (-) // 99.5 //
Probeset : 1629432_at
Accessions : protein= NP_524185;, nucleotide= NM_079461;
Pathway : 0005762 // mitochondrial large ribosomal subunit // inferred from sequence or structural similarity /// 0005840 // ribos
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0036990.
VDRC has 5 RNAi stocks for FBgn0036990 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain243 ± 74 of 4 1.10None
Head128 ± 84 of 4 0.60Down
Eye106 ± 24 of 4 0.48Down
Thoracicoabdominal ganglion256 ± 144 of 4 1.20None
Salivary gland77 ± 54 of 4 0.35Down
Crop130 ± 24 of 4 0.60Down
Midgut158 ± 64 of 4 0.70Down
Tubule146 ± 54 of 4 0.70Down
Hindgut171 ± 44 of 4 0.80Down
Heart140 ± 44 of 4 0.64Down
Fat body139 ± 124 of 4 0.63Down
Ovary343 ± 74 of 4 1.60Up
Testis198 ± 24 of 4 0.90None
Male accessory glands127 ± 114 of 4 0.60Down
Virgin spermatheca119 ± 104 of 4 0.54Down
Mated spermatheca136 ± 54 of 4 0.62Down
Adult carcass88 ± 74 of 4 0.40Down
Larval CNS251 ± 194 of 4 1.14None
Larval Salivary gland156 ± 24 of 4 0.71Down
Larval midgut98 ± 74 of 4 0.45Down
Larval tubule67 ± 24 of 4 0.30Down
Larval hindgut204 ± 174 of 4 0.93None
Larval fat body81 ± 134 of 4 0.40Down
Larval trachea183 ± 234 of 4 0.83None
Larval carcass151 ± 194 of 4 0.69Down
S2 cells (growing)173 ± 54 of 4 0.78Down
Whole fly221 ± 154 of 4

Looking for FBgn0036990. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime