FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0036995 through 18771 annotations produced 1 hits

(CG5195):

Annotation Number : CG5195
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036995
Gbrowse : chr3L:20447789-20457448 (-) // 100.0 //
Probeset : 1626578_at
Accessions : protein= NP_649228;, nucleotide= NM_140971;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0003887 // DNA-directed DNA polymerase activity // inferred from electronic annotation /// 0005515 // protein binding //
FlyMine data for FBgn0036995.
Homophila reports that CG5195 is a close match (3e-12) to human gene CSCD;DCN (NP_598010), a gene associated with Corneal dystrophy, congenital stromal, 610048 (3).
TRiP has 1 RNAi stocks for FBgn0036995 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036995 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	31 ± 5	4 of 4	4.50	Up
Head	22 ± 2	4 of 4	3.20	Up
Eye	21 ± 8	4 of 4	3.12	None
Thoracicoabdominal ganglion	13 ± 2	4 of 4	1.90	Up
Salivary gland	14 ± 2	0 of 4	2.06	Up
Crop	3 ± 0	0 of 4	0.50	Down
Midgut	16 ± 1	4 of 4	2.40	Up
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	2 ± 1	0 of 4	0.40	Down
Heart	2 ± 1	0 of 4	0.39	None
Fat body	7 ± 1	0 of 4	1.09	None
Ovary	2 ± 0	0 of 4	0.30	Down
Testis	92 ± 4	4 of 4	13.30	Up
Male accessory glands	3 ± 1	0 of 4	0.50	None
Virgin spermatheca	9 ± 1	0 of 4	1.34	None
Mated spermatheca	10 ± 1	1 of 4	1.46	None
Adult carcass	17 ± 3	0 of 4	2.60	Up
Larval CNS	52 ± 11	4 of 4	7.47	Up
Larval Salivary gland	8 ± 3	0 of 4	1.27	None
Larval midgut	3 ± 0	0 of 4	0.43	Down
Larval tubule	5 ± 0	1 of 4	0.80	None
Larval hindgut	6 ± 1	1 of 4	0.87	None
Larval fat body	23 ± 6	3 of 4	3.40	None
Larval trachea	5 ± 2	1 of 4	0.82	None
Larval carcass	3 ± 1	0 of 4	0.55	None
S2 cells (growing)	2 ± 0	0 of 4	0.35	Down
Whole fly	7 ± 1	0 of 4

Looking for FBgn0036995. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720