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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037010 through 18771 annotations produced 1 hits



Phosphatidylserine synthase /// (CG4825 /// DsecGM22203):

Annotation Number : CG4825
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037010
Gbrowse : chr3L:20515530-20519281 (-) // 100.0 //
Probeset : 1628240_at
Accessions : protein= NP_649242;, nucleotide= NM_140985;
Interpro : 0003882 // CDP-diacylglycerol-serine O-phosphatidyltransferase activity // inferred from sequence or structural similari
FlyMine data for FBgn0037010.
VDRC has 2 RNAi stocks for FBgn0037010 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain173 ± 94 of 4 0.60Down
Head307 ± 74 of 4 1.00None
Eye578 ± 284 of 4 1.95Up
Thoracicoabdominal ganglion151 ± 134 of 4 0.50Down
Salivary gland64 ± 104 of 4 0.22Down
Crop203 ± 84 of 4 0.70Down
Midgut87 ± 74 of 4 0.30Down
Tubule196 ± 144 of 4 0.70Down
Hindgut137 ± 54 of 4 0.50Down
Heart530 ± 464 of 4 1.79Up
Fat body764 ± 644 of 4 2.58Up
Ovary466 ± 54 of 4 1.60Up
Testis391 ± 84 of 4 1.30Up
Male accessory glands173 ± 174 of 4 0.60Down
Virgin spermatheca277 ± 64 of 4 0.94None
Mated spermatheca422 ± 324 of 4 1.43Up
Adult carcass391 ± 184 of 4 1.30Up
Larval CNS208 ± 174 of 4 0.70Down
Larval Salivary gland109 ± 94 of 4 0.37Down
Larval midgut115 ± 174 of 4 0.39Down
Larval tubule83 ± 34 of 4 0.30Down
Larval hindgut149 ± 214 of 4 0.50Down
Larval fat body211 ± 244 of 4 0.70Down
Larval trachea250 ± 534 of 4 0.85None
Larval carcass198 ± 254 of 4 0.67Down
S2 cells (growing)442 ± 84 of 4 1.49Up
Whole fly296 ± 84 of 4

Looking for FBgn0037010. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime