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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037013 through 18771 annotations produced 1 hits



(CG13250):

Annotation Number : CG13250
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037013
Gbrowse : chr3L:20526808-20528435 (+) // 100.0 //
Probeset : 1632953_at
Accessions : protein= NP_649245;, nucleotide= NM_140988;
FlyMine data for FBgn0037013.
VDRC has 3 RNAi stocks for FBgn0037013 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.50None
Head1 ± 00 of 4 0.90None
Eye2 ± 00 of 4 1.11None
Thoracicoabdominal ganglion6 ± 20 of 4 3.30None
Salivary gland5 ± 20 of 4 2.53None
Crop5 ± 00 of 4 2.70Up
Midgut9 ± 30 of 4 5.00None
Tubule5 ± 00 of 4 2.50Up
Hindgut5 ± 20 of 4 2.80None
Heart86 ± 84 of 443.54Up
Fat body10 ± 22 of 4 5.16Up
Ovary2 ± 00 of 4 1.20None
Testis3 ± 00 of 4 1.60None
Male accessory glands9 ± 10 of 4 4.80Up
Virgin spermatheca8 ± 12 of 4 4.16Up
Mated spermatheca6 ± 21 of 4 3.01None
Adult carcass10 ± 10 of 4 5.50Up
Larval CNS3 ± 00 of 4 1.57None
Larval Salivary gland8 ± 01 of 4 4.41Up
Larval midgut4 ± 10 of 4 2.04None
Larval tubule7 ± 10 of 4 3.60Up
Larval hindgut7 ± 13 of 4 3.84Up
Larval fat body7 ± 20 of 4 4.00None
Larval trachea2 ± 20 of 4 1.16None
Larval carcass10 ± 13 of 4 5.11Up
S2 cells (growing)29 ± 14 of 414.87Up
Whole fly2 ± 00 of 4

Looking for FBgn0037013. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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