FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037015 through 18771 annotations produced 2 hits

(CG13253):

Annotation Number : S.C3L002620
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037015
Gbrowse : chr3L:20706337-20708783 (-) // 100.0 //
Probeset : 1623315_at
Accessions : protein= NP_001097651; /// NP_001097652;, nucleotide= NM_001104181; /// NM_001104182;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005520 // insulin-like growth factor binding // inferred from electronic annotation
FlyMine data for FBgn0037015.
BDGP gene expression has embryonic in situ data for CG13253: 10 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0037015 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037015 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	204 ± 6	4 of 4	24.60	Up
Head	39 ± 3	3 of 4	4.80	Up
Eye	2 ± 1	0 of 4	0.31	None
Thoracicoabdominal ganglion	136 ± 4	4 of 4	16.50	Up
Salivary gland	3 ± 1	0 of 4	0.42	None
Crop	1 ± 0	0 of 4	0.10	None
Midgut	1 ± 0	0 of 4	0.20	None
Tubule	4 ± 0	0 of 4	0.60	Down
Hindgut	4 ± 1	0 of 4	0.60	None
Heart	2 ± 0	0 of 4	0.34	None
Fat body	8 ± 1	0 of 4	0.98	None
Ovary	0 ± 0	0 of 4	0.10	None
Testis	1 ± 0	0 of 4	0.20	None
Male accessory glands	1 ± 0	0 of 4	0.20	None
Virgin spermatheca	6 ± 1	0 of 4	0.82	None
Mated spermatheca	7 ± 2	0 of 4	0.92	None
Adult carcass	3 ± 1	0 of 4	0.40	None
Larval CNS	103 ± 18	4 of 4	12.45	Up
Larval Salivary gland	0 ± 0	0 of 4	0.11	None
Larval midgut	2 ± 0	0 of 4	0.25	None
Larval tubule	1 ± 0	0 of 4	0.10	None
Larval hindgut	1 ± 0	0 of 4	0.21	None
Larval fat body	1 ± 0	0 of 4	0.20	None
Larval trachea	0 ± 0	0 of 4	0.09	None
Larval carcass	2 ± 0	0 of 4	0.30	None
S2 cells (growing)	0 ± 0	0 of 4	0.10	None
Whole fly	8 ± 2	0 of 4

(CG13253):

Annotation Number : CG13253
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037015
Gbrowse : chr3L:20709894-20712298 (-) // 100.0 //
Probeset : 1625883_at
Accessions : protein= NP_001097651; /// NP_001097652;, nucleotide= NM_001104181; /// NM_001104182;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005520 // insulin-like growth factor binding // inferred from electronic annotation
FlyMine data for FBgn0037015.
BDGP gene expression has embryonic in situ data for CG13253: 10 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0037015 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037015 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	185 ± 7	4 of 4	32.10	Up
Head	37 ± 4	4 of 4	6.50	Up
Eye	7 ± 2	1 of 4	1.24	None
Thoracicoabdominal ganglion	78 ± 10	4 of 4	13.60	Up
Salivary gland	12 ± 5	0 of 4	2.12	None
Crop	6 ± 2	0 of 4	1.10	None
Midgut	2 ± 0	0 of 4	0.50	None
Tubule	3 ± 1	0 of 4	0.70	None
Hindgut	6 ± 2	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.30	None
Fat body	13 ± 1	0 of 4	2.39	Up
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	1 ± 0	0 of 4	0.20	None
Male accessory glands	7 ± 3	0 of 4	1.20	None
Virgin spermatheca	7 ± 1	0 of 4	1.22	None
Mated spermatheca	5 ± 2	0 of 4	0.92	None
Adult carcass	5 ± 2	0 of 4	1.00	None
Larval CNS	60 ± 16	4 of 4	10.48	Up
Larval Salivary gland	7 ± 0	0 of 4	1.37	None
Larval midgut	5 ± 2	0 of 4	0.95	None
Larval tubule	1 ± 0	0 of 4	0.20	None
Larval hindgut	5 ± 2	0 of 4	0.99	None
Larval fat body	3 ± 1	0 of 4	0.60	None
Larval trachea	1 ± 0	0 of 4	0.24	None
Larval carcass	6 ± 2	0 of 4	1.09	None
S2 cells (growing)	1 ± 0	0 of 4	0.22	None
Whole fly	5 ± 1	0 of 4

Looking for FBgn0037015. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720