FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037039 through 18771 annotations produced 2 hits

/// Calexcitin (CG10587 /// Scp2):

Annotation Number : CG14904
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020907
Gbrowse : chr3R:12400258-12409382 (-) // 100.0 //
Probeset : 1635398_at
Accessions : protein= NP_524381;, nucleotide= NM_079657;
Pathway : 0016529 // sarcoplasmic reticulum // inferred from sequence or structural similarity
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from dir
FlyMine data for FBgn0020907.
BioGrid reports that CG14904 interacts with CG3052 CG15071 CG1970 CG2146 CG3924 CG40127 CG5183 CG6425 CG6588 CG6770 CG7007 CG7361 CG7937 CG9113 CG9609 .
VDRC has 2 RNAi stocks for FBgn0020907 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1442 ± 35	4 of 4	7.40	Up
Head	1693 ± 78	4 of 4	8.70	Up
Eye	4274 ± 107	4 of 4	22.00	Up
Thoracicoabdominal ganglion	3065 ± 100	4 of 4	15.80	Up
Salivary gland	14 ± 4	0 of 4	0.07	Down
Crop	4 ± 0	0 of 4	0.00	Down
Midgut	7 ± 1	0 of 4	0.00	Down
Tubule	3687 ± 1347	4 of 4	19.00	Up
Hindgut	4 ± 1	2 of 4	0.00	Down
Heart	13 ± 2	4 of 4	0.07	Down
Fat body	89 ± 167	1 of 4	0.46	None
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	3 ± 0	0 of 4	0.00	Down
Male accessory glands	5 ± 1	0 of 4	0.00	Down
Virgin spermatheca	4 ± 2	0 of 4	0.02	Down
Mated spermatheca	4 ± 1	0 of 4	0.02	Down
Adult carcass	51 ± 9	4 of 4	0.30	Down
Larval CNS	141 ± 20	4 of 4	0.73	Down
Larval Salivary gland	5 ± 1	1 of 4	0.03	Down
Larval midgut	14 ± 4	2 of 4	0.07	Down
Larval tubule	3962 ± 56	4 of 4	20.40	Up
Larval hindgut	11 ± 3	3 of 4	0.06	Down
Larval fat body	12 ± 5	2 of 4	0.10	Down
Larval trachea	106 ± 148	4 of 4	0.55	None
Larval carcass	62 ± 7	4 of 4	0.32	Down
S2 cells (growing)	3 ± 0	0 of 4	0.02	Down
Whole fly	194 ± 8	4 of 4

(CG10587):

Annotation Number : CG10587
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037039
Gbrowse : chr3L:20954661-20955645 (-) // 100.0 //
Probeset : 1636220_at
Accessions : protein= NP_001137989; /// NP_649273;, nucleotide= NM_001144517; /// NM_141016;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004175 // endopeptidase activity // inferred f
FlyMine data for FBgn0037039.
Homophila reports that CG10587 is a close match (5e-11) to human gene F7 (NP_062562), a gene associated with Factor VII deficiency (3);{Myocardial infarction, decreased susceptibility to} (3).
VDRC has 2 RNAi stocks for FBgn0037039 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	2 ± 0	0 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.06	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.00	Down
Salivary gland	1 ± 0	0 of 4	0.06	Down
Crop	0 ± 0	0 of 4	0.00	Down
Midgut	13 ± 2	2 of 4	0.50	Down
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	1 ± 0	0 of 4	0.00	Down
Heart	0 ± 0	0 of 4	0.02	Down
Fat body	1 ± 0	0 of 4	0.05	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	3 ± 2	0 of 4	0.10	Down
Male accessory glands	3042 ± 81	4 of 4	110.20	Up
Virgin spermatheca	1 ± 0	0 of 4	0.04	Down
Mated spermatheca	0 ± 0	0 of 4	0.03	Down
Adult carcass	5 ± 2	0 of 4	0.20	Down
Larval CNS	0 ± 0	0 of 4	0.02	Down
Larval Salivary gland	1 ± 0	0 of 4	0.06	Down
Larval midgut	7 ± 2	0 of 4	0.28	Down
Larval tubule	2 ± 1	0 of 4	0.10	Down
Larval hindgut	1 ± 0	0 of 4	0.05	Down
Larval fat body	6 ± 3	0 of 4	0.20	Down
Larval trachea	0 ± 0	0 of 4	0.03	Down
Larval carcass	2 ± 0	0 of 4	0.08	Down
S2 cells (growing)	0 ± 0	0 of 4	0.03	Down
Whole fly	27 ± 1	4 of 4

Looking for FBgn0037039. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720