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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037045 through 18771 annotations produced 1 hits



(CG10584):

Annotation Number : CG10584
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037045
Gbrowse : chr3L:21023524-21024349 (-) // 100.0 //
Probeset : 1628530_at
Accessions : protein= NP_649278;, nucleotide= NM_141021;
FlyMine data for FBgn0037045.
VDRC has 3 RNAi stocks for FBgn0037045 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain78 ± 44 of 4 0.90None
Head76 ± 34 of 4 0.90None
Eye193 ± 114 of 4 2.23Up
Thoracicoabdominal ganglion106 ± 44 of 4 1.20Up
Salivary gland100 ± 44 of 4 1.16Up
Crop76 ± 24 of 4 0.90None
Midgut39 ± 34 of 4 0.50Down
Tubule137 ± 54 of 4 1.60Up
Hindgut73 ± 24 of 4 0.80Down
Heart90 ± 54 of 4 1.04None
Fat body37 ± 34 of 4 0.43Down
Ovary148 ± 44 of 4 1.70Up
Testis34 ± 34 of 4 0.40Down
Male accessory glands111 ± 74 of 4 1.30Up
Virgin spermatheca36 ± 14 of 4 0.42Down
Mated spermatheca50 ± 44 of 4 0.58Down
Adult carcass80 ± 44 of 4 0.90None
Larval CNS65 ± 34 of 4 0.75Down
Larval Salivary gland56 ± 24 of 4 0.65Down
Larval midgut29 ± 13 of 4 0.34Down
Larval tubule51 ± 24 of 4 0.60Down
Larval hindgut52 ± 34 of 4 0.60Down
Larval fat body35 ± 14 of 4 0.40Down
Larval trachea82 ± 34 of 4 0.95None
Larval carcass60 ± 44 of 4 0.70Down
S2 cells (growing)105 ± 14 of 4 1.21Up
Whole fly86 ± 34 of 4

Looking for FBgn0037045. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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