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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037046 through 18771 annotations produced 1 hits



(CG10581):

Annotation Number : CG10581
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037046
Gbrowse : chr3L:21026659-21027183 (-) // 100.0 //
Probeset : 1640845_at
Accessions : protein= NP_649279;, nucleotide= NM_141022;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0005524 // ATP binding // inferred from electro
FlyMine data for FBgn0037046.
VDRC has 5 RNAi stocks for FBgn0037046 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain79 ± 34 of 4 1.80Up
Head95 ± 34 of 4 2.20Up
Eye220 ± 134 of 4 5.11Up
Thoracicoabdominal ganglion82 ± 64 of 4 1.90Up
Salivary gland45 ± 114 of 4 1.06None
Crop61 ± 24 of 4 1.40Up
Midgut74 ± 14 of 4 1.70Up
Tubule94 ± 94 of 4 2.20Up
Hindgut54 ± 24 of 4 1.30Up
Heart122 ± 74 of 4 2.84Up
Fat body91 ± 34 of 4 2.12Up
Ovary16 ± 04 of 4 0.40Down
Testis93 ± 34 of 4 2.20Up
Male accessory glands38 ± 34 of 4 0.90None
Virgin spermatheca72 ± 64 of 4 1.68Up
Mated spermatheca71 ± 44 of 4 1.65Up
Adult carcass79 ± 24 of 4 1.80Up
Larval CNS91 ± 394 of 4 2.13None
Larval Salivary gland13 ± 23 of 4 0.31Down
Larval midgut51 ± 24 of 4 1.19None
Larval tubule99 ± 104 of 4 2.30Up
Larval hindgut53 ± 04 of 4 1.24Up
Larval fat body136 ± 124 of 4 3.20Up
Larval trachea67 ± 114 of 4 1.56Up
Larval carcass68 ± 44 of 4 1.60Up
S2 cells (growing)106 ± 44 of 4 2.48Up
Whole fly43 ± 24 of 4

Looking for FBgn0037046. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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