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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037063 through 18771 annotations produced 1 hits



(CG9391):

Annotation Number : CG9391
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037063
Gbrowse : chr3L:21259877-21261440 (-) // 100.0 //
Probeset : 1641502_a_at
Accessions : protein= NP_649294;, nucleotide= NM_141037;
Interpro : 0004437 // inositol or phosphatidylinositol phosphatase activity // inferred from electronic annotation /// 0008934 // i
FlyMine data for FBgn0037063.
BDGP gene expression has embryonic in situ data for CG9391: 13 pix of staining in 3 body parts.
VDRC has 2 RNAi stocks for FBgn0037063 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain215 84 of 4 1.40Up
Head364 74 of 4 2.30Up
Eye1060 284 of 4 6.70Up
Thoracicoabdominal ganglion126 24 of 4 0.80None
Salivary gland343 104 of 4 2.17Up
Crop542 184 of 4 3.40Up
Midgut317 64 of 4 2.00Up
Tubule1191 474 of 4 7.50Up
Hindgut445 174 of 4 2.80Up
Heart261 144 of 4 1.65Up
Fat body163 174 of 4 1.03None
Ovary167 54 of 4 1.10None
Testis148 54 of 4 0.90None
Male accessory glands134 104 of 4 0.80None
Virgin spermatheca414 74 of 4 2.62Up
Mated spermatheca291 354 of 4 1.84Up
Adult carcass125 84 of 4 0.80None
Larval CNS161 214 of 4 1.02None
Larval Salivary gland119 94 of 4 0.76None
Larval midgut84 54 of 4 0.54Down
Larval tubule203 94 of 4 1.30Up
Larval hindgut122 34 of 4 0.78None
Larval fat body71 54 of 4 0.50Down
Larval trachea160 114 of 4 1.02None
Larval carcass130 74 of 4 0.82None
S2 cells (growing)174 54 of 4 1.10None
Whole fly158 144 of 4

Looking for FBgn0037063. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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