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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037074 through 18771 annotations produced 1 hits



(CG7324):

Annotation Number : CG7324
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037074
Gbrowse : chr3L:21330779-21336816 (-) // 100.0 //
Probeset : 1641332_at
Accessions : protein= NP_649305;, nucleotide= NM_141048;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005097 // Rab GTPase activator activity // inferred from sequence or structural similarity /// 0005097 // Rab GTPase ac
FlyMine data for FBgn0037074.
BioGrid reports that CG7324 interacts with CG8956 CG9238 .
TRiP has 1 RNAi stocks for FBgn0037074 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037074 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain12 ± 14 of 4 0.40Down
Head20 ± 24 of 4 0.60None
Eye21 ± 34 of 4 0.67None
Thoracicoabdominal ganglion19 ± 34 of 4 0.60None
Salivary gland27 ± 32 of 4 0.83None
Crop47 ± 34 of 4 1.50Up
Midgut47 ± 24 of 4 1.50Up
Tubule19 ± 13 of 4 0.60Down
Hindgut28 ± 34 of 4 0.90None
Heart28 ± 54 of 4 0.87None
Fat body32 ± 44 of 4 0.99None
Ovary75 ± 24 of 4 2.30Up
Testis8 ± 03 of 4 0.30Down
Male accessory glands65 ± 14 of 4 2.00Up
Virgin spermatheca17 ± 14 of 4 0.54Down
Mated spermatheca22 ± 24 of 4 0.68None
Adult carcass19 ± 43 of 4 0.60None
Larval CNS40 ± 44 of 4 1.24None
Larval Salivary gland47 ± 64 of 4 1.47None
Larval midgut21 ± 23 of 4 0.65None
Larval tubule22 ± 24 of 4 0.70None
Larval hindgut21 ± 14 of 4 0.66None
Larval fat body23 ± 23 of 4 0.70None
Larval trachea47 ± 104 of 4 1.47None
Larval carcass41 ± 64 of 4 1.28None
S2 cells (growing)22 ± 14 of 4 0.71None
Whole fly32 ± 44 of 4

Looking for FBgn0037074. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime