Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037081 through 18771 annotations produced 1 hits



(CG6049):

Annotation Number : CG6049
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037081
Gbrowse : chr3L:21413482-21426182 (-) // 100.0 //
Probeset : 1641529_s_at
Accessions : protein= NP_649313; /// NP_730628; /// NP_730629;, nucleotide= NM_141056; /// NM_168901; /// NM_168902;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0037081.
BDGP gene expression has embryonic in situ data for CG6049: 4 pix of staining in 1 body parts.
BioGrid reports that CG6049 interacts with CG8996 CG9776 .
TRiP has 1 RNAi stocks for FBgn0037081 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037081 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain373 94 of 4 3.30Up
Head129 24 of 4 1.10Up
Eye145 44 of 4 1.28Up
Thoracicoabdominal ganglion299 164 of 4 2.60Up
Salivary gland76 14 of 4 0.67Down
Crop122 44 of 4 1.10None
Midgut75 44 of 4 0.70Down
Tubule86 34 of 4 0.80Down
Hindgut96 24 of 4 0.80Down
Heart75 34 of 4 0.66Down
Fat body66 34 of 4 0.58Down
Ovary201 44 of 4 1.80Up
Testis104 34 of 4 0.90None
Male accessory glands131 24 of 4 1.20Up
Virgin spermatheca97 54 of 4 0.86None
Mated spermatheca102 64 of 4 0.90None
Adult carcass97 44 of 4 0.90Down
Larval CNS170 114 of 4 1.49Up
Larval Salivary gland148 24 of 4 1.30Up
Larval midgut62 24 of 4 0.55Down
Larval tubule102 34 of 4 0.90None
Larval hindgut79 24 of 4 0.69Down
Larval fat body66 34 of 4 0.60Down
Larval trachea106 94 of 4 0.93None
Larval carcass100 44 of 4 0.88None
S2 cells (growing)148 54 of 4 1.30Up
Whole fly114 44 of 4

Looking for FBgn0037081. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime