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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037105 through 18771 annotations produced 1 hits



S1P (S1P):

Annotation Number : CG7169
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037105
Gbrowse : chr3L:21607075-21610407 (-) // 100.0 //
Probeset : 1639666_at
Accessions : protein= NP_649337;, nucleotide= NM_141080;
Interpro : 0004252 // serine-type endopeptidase activity // inferred from sequence or structural similarity /// 0004252 // serine-t
FlyMine data for FBgn0037105.
VDRC has 1 RNAi stocks for FBgn0037105 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain116 ± 64 of 4 2.20Up
Head45 ± 34 of 4 0.90None
Eye25 ± 14 of 4 0.48Down
Thoracicoabdominal ganglion98 ± 24 of 4 1.80Up
Salivary gland51 ± 64 of 4 0.97None
Crop62 ± 64 of 4 1.20None
Midgut24 ± 24 of 4 0.50Down
Tubule37 ± 14 of 4 0.70Down
Hindgut49 ± 24 of 4 0.90None
Heart30 ± 34 of 4 0.56Down
Fat body18 ± 44 of 4 0.35Down
Ovary153 ± 54 of 4 2.90Up
Testis41 ± 14 of 4 0.80Down
Male accessory glands45 ± 34 of 4 0.90None
Virgin spermatheca24 ± 24 of 4 0.46Down
Mated spermatheca27 ± 14 of 4 0.51Down
Adult carcass29 ± 64 of 4 0.50Down
Larval CNS68 ± 44 of 4 1.28Up
Larval Salivary gland34 ± 24 of 4 0.64Down
Larval midgut23 ± 14 of 4 0.44Down
Larval tubule40 ± 14 of 4 0.80Down
Larval hindgut47 ± 34 of 4 0.90None
Larval fat body14 ± 33 of 4 0.30Down
Larval trachea41 ± 74 of 4 0.77Down
Larval carcass22 ± 14 of 4 0.41Down
S2 cells (growing)110 ± 24 of 4 2.07Up
Whole fly53 ± 24 of 4

Looking for FBgn0037105. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime