FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037114 through 18771 annotations produced 1 hits

CG7160 (Cpr78E):

Annotation Number : CG7160
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037114
Gbrowse : chr3L:21659553-21660080 (-) // 100.0 //
Probeset : 1638017_at
Accessions : protein= NP_649345;, nucleotide= NM_141088;
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0042302
FlyMine data for FBgn0037114.
BDGP gene expression has embryonic in situ data for CG7160: 8 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0037114 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 0	0 of 4	0.50	None
Head	6 ± 2	0 of 4	1.00	None
Eye	12 ± 4	3 of 4	1.89	None
Thoracicoabdominal ganglion	7 ± 2	1 of 4	1.10	None
Salivary gland	12 ± 2	0 of 4	1.84	None
Crop	179 ± 2	4 of 4	27.10	Up
Midgut	36 ± 2	4 of 4	5.60	Up
Tubule	9 ± 1	0 of 4	1.50	None
Hindgut	45 ± 2	4 of 4	6.80	Up
Heart	46 ± 2	4 of 4	7.07	Up
Fat body	8 ± 1	0 of 4	1.25	None
Ovary	4 ± 1	0 of 4	0.60	None
Testis	8 ± 1	1 of 4	1.30	None
Male accessory glands	28 ± 2	4 of 4	4.30	Up
Virgin spermatheca	1 ± 0	0 of 4	0.17	None
Mated spermatheca	2 ± 0	0 of 4	0.33	None
Adult carcass	20 ± 3	2 of 4	3.10	Up
Larval CNS	30 ± 4	4 of 4	4.56	Up
Larval Salivary gland	3 ± 1	0 of 4	0.48	None
Larval midgut	20 ± 1	2 of 4	3.02	Up
Larval tubule	4 ± 1	0 of 4	0.60	None
Larval hindgut	261 ± 73	4 of 4	39.46	Up
Larval fat body	6 ± 2	1 of 4	1.00	None
Larval trachea	1320 ± 592	4 of 4	199.38	Up
Larval carcass	4948 ± 479	4 of 4	746.94	Up
S2 cells (growing)	2 ± 0	0 of 4	0.34	None
Whole fly	6 ± 1	0 of 4

Looking for FBgn0037114. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720