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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037122 through 18771 annotations produced 1 hits



(CG14570):

Annotation Number : CG14570
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037122
Gbrowse : chr3L:21722769-21723549 (-) // 100.0 //
Probeset : 1640593_at
Accessions : protein= NP_649353;, nucleotide= NM_141096;
FlyMine data for FBgn0037122.
BDGP gene expression has embryonic in situ data for CG14570: 4 pix of staining in 1 body parts.
BioGrid reports that CG14570 interacts with CG3510 .
VDRC has 3 RNAi stocks for FBgn0037122 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 10 of 4 0.60Down
Head12 ± 10 of 4 1.10None
Eye6 ± 10 of 4 0.52Down
Thoracicoabdominal ganglion7 ± 20 of 4 0.60None
Salivary gland14 ± 50 of 4 1.23None
Crop13 ± 30 of 4 1.10None
Midgut26 ± 00 of 4 2.20Up
Tubule10 ± 20 of 4 0.80None
Hindgut12 ± 10 of 4 1.10None
Heart8 ± 00 of 4 0.69Down
Fat body23 ± 60 of 4 1.96Up
Ovary11 ± 20 of 4 1.00None
Testis10 ± 10 of 4 0.90None
Male accessory glands19 ± 50 of 4 1.60None
Virgin spermatheca9 ± 30 of 4 0.80None
Mated spermatheca10 ± 10 of 4 0.88None
Adult carcass20 ± 40 of 4 1.70None
Larval CNS8 ± 20 of 4 0.67Down
Larval Salivary gland13 ± 20 of 4 1.15None
Larval midgut20 ± 00 of 4 1.70Up
Larval tubule15 ± 21 of 4 1.30None
Larval hindgut16 ± 30 of 4 1.39None
Larval fat body13 ± 40 of 4 1.10None
Larval trachea12 ± 03 of 4 1.02None
Larval carcass22 ± 10 of 4 1.84Up
S2 cells (growing)13 ± 10 of 4 1.15None
Whole fly12 ± 10 of 4

Looking for FBgn0037122. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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