FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037124 through 18771 annotations produced 1 hits

(CG14568):

Annotation Number : CG14568
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037124
Gbrowse : chr3L:21725908-21726584 (-) // 100.0 //
Probeset : 1636390_at
Accessions : protein= NP_649355;, nucleotide= NM_141098;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037124.
BDGP gene expression has embryonic in situ data for CG14568: 4 pix of staining in 1 body parts.
BioGrid reports that CG14568 interacts with CG30463 CG32654 CG5618 .
VDRC has 2 RNAi stocks for FBgn0037124 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.20	None
Head	9 ± 1	0 of 4	0.50	None
Eye	1 ± 0	0 of 4	0.08	Down
Thoracicoabdominal ganglion	9 ± 2	0 of 4	0.50	None
Salivary gland	21 ± 2	0 of 4	1.12	None
Crop	10 ± 2	0 of 4	0.50	None
Midgut	9 ± 3	0 of 4	0.50	None
Tubule	7 ± 1	0 of 4	0.40	Down
Hindgut	13 ± 1	1 of 4	0.70	None
Heart	3 ± 1	0 of 4	0.20	Down
Fat body	11 ± 4	0 of 4	0.63	None
Ovary	6 ± 0	0 of 4	0.30	None
Testis	11 ± 1	3 of 4	0.60	None
Male accessory glands	5 ± 1	0 of 4	0.30	None
Virgin spermatheca	11 ± 1	1 of 4	0.63	None
Mated spermatheca	10 ± 2	1 of 4	0.54	None
Adult carcass	19 ± 3	2 of 4	1.00	None
Larval CNS	6 ± 3	1 of 4	0.32	None
Larval Salivary gland	12 ± 4	0 of 4	0.68	None
Larval midgut	12 ± 1	0 of 4	0.67	None
Larval tubule	10 ± 1	1 of 4	0.50	None
Larval hindgut	11 ± 0	1 of 4	0.64	None
Larval fat body	14 ± 1	0 of 4	0.80	None
Larval trachea	8 ± 4	2 of 4	0.44	None
Larval carcass	11 ± 2	1 of 4	0.62	None
S2 cells (growing)	6 ± 1	0 of 4	0.33	None
Whole fly	18 ± 4	2 of 4

Looking for FBgn0037124. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720