FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037126 through 18771 annotations produced 1 hits

(CG14567):

Annotation Number : CG14567
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037126
Gbrowse : chr3L:21730861-21731434 (-) // 100.0 //
Probeset : 1640978_at
Accessions : protein= NP_649357;, nucleotide= NM_141100;
FlyMine data for FBgn0037126.
BDGP gene expression has embryonic in situ data for CG14567: 4 pix of staining in 1 body parts.
BioGrid reports that CG14567 interacts with CG6058 .
VDRC has 1 RNAi stocks for FBgn0037126 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	0 of 4	0.20	Down
Head	207 ± 18	4 of 4	5.30	Up
Eye	26 ± 5	3 of 4	0.66	None
Thoracicoabdominal ganglion	7 ± 2	1 of 4	0.20	Down
Salivary gland	12 ± 4	0 of 4	0.30	Down
Crop	124 ± 3	4 of 4	3.10	Up
Midgut	3 ± 0	0 of 4	0.10	Down
Tubule	4 ± 1	0 of 4	0.10	Down
Hindgut	25 ± 1	4 of 4	0.60	Down
Heart	30 ± 16	1 of 4	0.77	None
Fat body	51 ± 11	4 of 4	1.30	None
Ovary	3 ± 1	0 of 4	0.10	Down
Testis	4 ± 2	0 of 4	0.10	Down
Male accessory glands	22 ± 4	1 of 4	0.60	Down
Virgin spermatheca	81 ± 13	4 of 4	2.05	Up
Mated spermatheca	51 ± 9	4 of 4	1.30	None
Adult carcass	166 ± 22	4 of 4	4.20	Up
Larval CNS	9 ± 1	2 of 4	0.24	Down
Larval Salivary gland	18 ± 5	0 of 4	0.47	Down
Larval midgut	1 ± 0	0 of 4	0.04	Down
Larval tubule	3 ± 1	0 of 4	0.10	Down
Larval hindgut	38 ± 5	4 of 4	0.97	None
Larval fat body	362 ± 68	4 of 4	9.20	Up
Larval trachea	213 ± 58	4 of 4	5.41	Up
Larval carcass	66 ± 9	3 of 4	1.67	None
S2 cells (growing)	4 ± 1	0 of 4	0.12	Down
Whole fly	39 ± 4	4 of 4

Looking for FBgn0037126. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720