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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037128 through 18771 annotations produced 1 hits



(CG14572):

Annotation Number : CG14572
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037128
Gbrowse : chr3L:21734638-21735542 (+) // 100.0 //
Probeset : 1630725_at
Accessions : protein= NP_649359;, nucleotide= NM_141102;
FlyMine data for FBgn0037128.
BDGP gene expression has embryonic in situ data for CG14572: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0037128 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.30Down
Head9 ± 20 of 4 1.10None
Eye47 ± 163 of 4 5.67None
Thoracicoabdominal ganglion4 ± 01 of 4 0.50Down
Salivary gland6 ± 10 of 4 0.74None
Crop3 ± 10 of 4 0.50Down
Midgut8 ± 10 of 4 1.00None
Tubule2 ± 00 of 4 0.30Down
Hindgut3 ± 10 of 4 0.50None
Heart4 ± 10 of 4 0.55None
Fat body8 ± 20 of 4 0.96None
Ovary1 ± 00 of 4 0.20Down
Testis3 ± 10 of 4 0.40Down
Male accessory glands4 ± 20 of 4 0.50None
Virgin spermatheca5 ± 10 of 4 0.65None
Mated spermatheca8 ± 10 of 4 1.03None
Adult carcass5 ± 20 of 4 0.70None
Larval CNS124 ± 534 of 414.86Up
Larval Salivary gland181 ± 314 of 421.66Up
Larval midgut160 ± 84 of 419.19Up
Larval tubule5 ± 10 of 4 0.60None
Larval hindgut231 ± 214 of 427.67Up
Larval fat body6 ± 30 of 4 0.80None
Larval trachea4085 ± 1174 of 4487.80Up
Larval carcass172 ± 214 of 420.57Up
S2 cells (growing)2 ± 10 of 4 0.28Down
Whole fly8 ± 00 of 4

Looking for FBgn0037128. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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