FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037143 through 18771 annotations produced 2 hits

(CG7448):

Annotation Number : S.C3L002796
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037143
Gbrowse : chr3L:21944293-21944612 (+) // 100.0 //
Probeset : 1638281_at
Accessions : protein= NP_649373; /// NP_996146;, nucleotide= NM_141116; /// NM_206424;
Interpro : 0008513 // secondary active organic cation transmembrane transporter activity // inferred from sequence or structural si
FlyMine data for FBgn0037143.
BDGP gene expression has embryonic in situ data for CG7448: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0037143 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037143 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	10 ± 1	0 of 4	0.80	None
Head	12 ± 2	0 of 4	0.90	None
Eye	8 ± 1	1 of 4	0.67	None
Thoracicoabdominal ganglion	17 ± 1	2 of 4	1.40	None
Salivary gland	41 ± 7	0 of 4	3.18	Up
Crop	16 ± 1	2 of 4	1.30	None
Midgut	35 ± 5	4 of 4	2.80	Up
Tubule	17 ± 0	2 of 4	1.40	Up
Hindgut	18 ± 1	0 of 4	1.40	None
Heart	6 ± 0	0 of 4	0.54	None
Fat body	27 ± 4	2 of 4	2.16	Up
Ovary	10 ± 1	1 of 4	0.80	None
Testis	14 ± 1	3 of 4	1.10	None
Male accessory glands	36 ± 0	0 of 4	2.80	Up
Virgin spermatheca	12 ± 1	1 of 4	0.96	None
Mated spermatheca	19 ± 2	1 of 4	1.53	None
Adult carcass	32 ± 6	1 of 4	2.50	None
Larval CNS	13 ± 2	2 of 4	1.06	None
Larval Salivary gland	21 ± 3	1 of 4	1.68	None
Larval midgut	32 ± 7	4 of 4	2.50	None
Larval tubule	34 ± 1	4 of 4	2.70	Up
Larval hindgut	22 ± 2	0 of 4	1.74	None
Larval fat body	26 ± 5	2 of 4	2.10	None
Larval trachea	9 ± 3	2 of 4	0.70	None
Larval carcass	24 ± 1	1 of 4	1.90	Up
S2 cells (growing)	15 ± 1	0 of 4	1.17	None
Whole fly	12 ± 3	1 of 4

(CG7448):

Annotation Number : CG7448
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037143
Gbrowse : chr3L:21942924-21943951 (+) // 100.0 //
Probeset : 1632534_at
Accessions : protein= NP_649373; /// NP_996146;, nucleotide= NM_141116; /// NM_206424;
Interpro : 0008513 // secondary active organic cation transmembrane transporter activity // inferred from sequence or structural si
FlyMine data for FBgn0037143.
BDGP gene expression has embryonic in situ data for CG7448: 4 pix of staining in 1 body parts.
Homophila reports that CG7448 is a close match (4e-13) to human gene OCTN1;SLC22A4 (NP_003050), a gene associated with {Crohn disease, susceptibility to}, 266600 (3);{Rheumatoid arthritis, susceptibility to}, 180300 (3).
TRiP has 1 RNAi stocks for FBgn0037143 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037143 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.20	Down
Head	1 ± 0	0 of 4	0.20	Down
Eye	3 ± 1	0 of 4	0.49	None
Thoracicoabdominal ganglion	4 ± 1	1 of 4	0.70	None
Salivary gland	4 ± 1	0 of 4	0.75	None
Crop	2 ± 0	0 of 4	0.30	None
Midgut	1 ± 0	0 of 4	0.30	Down
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	1 ± 0	0 of 4	0.20	Down
Heart	1 ± 1	0 of 4	0.26	Down
Fat body	6 ± 4	0 of 4	0.92	None
Ovary	1 ± 0	0 of 4	0.30	Down
Testis	54 ± 3	4 of 4	8.50	Up
Male accessory glands	4 ± 3	0 of 4	0.70	None
Virgin spermatheca	2 ± 0	0 of 4	0.42	None
Mated spermatheca	3 ± 1	0 of 4	0.46	None
Adult carcass	2 ± 0	0 of 4	0.40	None
Larval CNS	2 ± 1	0 of 4	0.36	None
Larval Salivary gland	1 ± 0	0 of 4	0.15	Down
Larval midgut	0 ± 0	0 of 4	0.13	Down
Larval tubule	3 ± 1	0 of 4	0.60	None
Larval hindgut	2 ± 0	0 of 4	0.37	None
Larval fat body	10 ± 5	1 of 4	1.60	None
Larval trachea	0 ± 0	0 of 4	0.10	Down
Larval carcass	1 ± 0	0 of 4	0.17	Down
S2 cells (growing)	1 ± 0	0 of 4	0.26	Down
Whole fly	6 ± 1	0 of 4

Looking for FBgn0037143. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720