Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037144 through 18771 annotations produced 1 hits



(CG7458):

Annotation Number : CG7458
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037144 /// FBgn0085291
Gbrowse : chr3L:21948210-21951141 (+) // 100.0 // /// chr3L:21952536-21953603 (+) // 43.74 // /// chrUextra:366101-367160 (-) // 43.37 //
Probeset : 1639587_s_at
Accessions : protein= NP_649374;, nucleotide= NM_141117;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0008513 // secondary active organic cation tr
FlyMine data for FBgn0037144 /// FBgn0085291.
Homophila reports that CG7458 is a close match (1e-29) to human gene OAT4L;SLC22A12;URAT1 (NP_700357), a gene associated with Hypouricemia, renal, 220150 (3).


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain13 12 of 4 0.20Down
Head37 44 of 4 0.40Down
Eye28 34 of 4 0.32Down
Thoracicoabdominal ganglion10 30 of 4 0.10Down
Salivary gland56 54 of 4 0.65Down
Crop7 20 of 4 0.10Down
Midgut176 94 of 4 2.00Up
Tubule231 134 of 4 2.60Up
Hindgut25 14 of 4 0.30Down
Heart39 14 of 4 0.45Down
Fat body70 64 of 4 0.80None
Ovary168 34 of 4 1.90Up
Testis58 44 of 4 0.70Down
Male accessory glands141 64 of 4 1.60Up
Virgin spermatheca29 24 of 4 0.34Down
Mated spermatheca34 24 of 4 0.39Down
Adult carcass42 24 of 4 0.50Down
Larval CNS13 22 of 4 0.15Down
Larval Salivary gland83 74 of 4 0.94None
Larval midgut125 84 of 4 1.43Up
Larval tubule66 24 of 4 0.80None
Larval hindgut44 44 of 4 0.51Down
Larval fat body29 14 of 4 0.30Down
Larval trachea16 14 of 4 0.19Down
Larval carcass49 144 of 4 0.56None
S2 cells (growing)22 24 of 4 0.25Down
Whole fly88 94 of 4

Looking for FBgn0037144. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime