FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037147 through 18771 annotations produced 1 hits

(CG7140):

Annotation Number : CG7140
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037147
Gbrowse : chr3L:22019319-22021425 (-) // 100.0 //
Probeset : 1638573_at
Accessions : protein= NP_649376;, nucleotide= NM_141119;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004345 // glucose-6-phosphate dehydrogenase ac
FlyMine data for FBgn0037147.
Homophila reports that CG7140 is a close match (2e-40) to human gene G6PDH;GDH;H6PD (NP_004276), a gene associated with Cortisone reductase deficiency, 604931 (3).
VDRC has 2 RNAi stocks for FBgn0037147 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	2 ± 0	0 of 4	0.00	Down
Eye	0 ± 0	0 of 4	0.01	Down
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.00	Down
Salivary gland	4 ± 0	0 of 4	0.08	Down
Crop	4 ± 1	0 of 4	0.10	Down
Midgut	2 ± 0	0 of 4	0.00	Down
Tubule	3 ± 0	0 of 4	0.10	Down
Hindgut	2 ± 0	0 of 4	0.00	Down
Heart	0 ± 0	0 of 4	0.02	Down
Fat body	2 ± 0	0 of 4	0.03	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	599 ± 23	4 of 4	10.30	Up
Male accessory glands	508 ± 62	4 of 4	8.70	Up
Virgin spermatheca	1 ± 0	0 of 4	0.03	Down
Mated spermatheca	1 ± 0	0 of 4	0.03	Down
Adult carcass	7 ± 2	0 of 4	0.10	Down
Larval CNS	0 ± 0	0 of 4	0.01	Down
Larval Salivary gland	2 ± 1	0 of 4	0.05	Down
Larval midgut	3 ± 0	0 of 4	0.05	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	1 ± 0	0 of 4	0.03	Down
Larval fat body	57 ± 25	2 of 4	1.00	None
Larval trachea	2 ± 3	0 of 4	0.05	Down
Larval carcass	12 ± 3	0 of 4	0.22	Down
S2 cells (growing)	1 ± 0	0 of 4	0.02	Down
Whole fly	58 ± 2	3 of 4

Looking for FBgn0037147. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720