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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037150 through 18771 annotations produced 1 hits



(CG7133):

Annotation Number : CG7133
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037150
Gbrowse : chr3L:22066156-22067622 (-) // 100.0 //
Probeset : 1635564_at
Accessions : protein= NP_649379;, nucleotide= NM_141122;
Interpro : 0031072 // heat shock protein binding // inferred from electronic annotation /// 0051082 // unfolded protein binding //
FlyMine data for FBgn0037150.
VDRC has 2 RNAi stocks for FBgn0037150 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain77 24 of 4 0.70Down
Head108 34 of 4 1.00None
Eye181 54 of 4 1.65Up
Thoracicoabdominal ganglion61 34 of 4 0.60Down
Salivary gland253 84 of 4 2.30Up
Crop125 54 of 4 1.10None
Midgut98 14 of 4 0.90None
Tubule96 64 of 4 0.90Down
Hindgut109 64 of 4 1.00None
Heart114 24 of 4 1.04None
Fat body123 164 of 4 1.13None
Ovary184 24 of 4 1.70Up
Testis30 24 of 4 0.30Down
Male accessory glands232 74 of 4 2.10Up
Virgin spermatheca89 44 of 4 0.81None
Mated spermatheca83 14 of 4 0.76None
Adult carcass88 24 of 4 0.80None
Larval CNS192 204 of 4 1.75Up
Larval Salivary gland264 94 of 4 2.41Up
Larval midgut67 54 of 4 0.61Down
Larval tubule136 34 of 4 1.20None
Larval hindgut110 54 of 4 1.01None
Larval fat body167 204 of 4 1.50None
Larval trachea186 144 of 4 1.69Up
Larval carcass160 34 of 4 1.46Up
S2 cells (growing)137 64 of 4 1.25None
Whole fly109 104 of 4

Looking for FBgn0037150. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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