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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037167 through 18771 annotations produced 1 hits



(CG11425):

Annotation Number : CG11425
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037167
Gbrowse : chr3L:22467894-22468850 (+) // 100.0 //
Probeset : 1633796_at
Accessions : protein= NP_649395;, nucleotide= NM_141138;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0008195 // phosphatidate phosphatase activity /
FlyMine data for FBgn0037167.
VDRC has 2 RNAi stocks for FBgn0037167 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain68 24 of 4 1.80Up
Head163 304 of 4 4.40Up
Eye72 294 of 4 1.96None
Thoracicoabdominal ganglion74 34 of 4 2.00Up
Salivary gland11 20 of 4 0.30Down
Crop98 54 of 4 2.70Up
Midgut6 20 of 4 0.20Down
Tubule7 10 of 4 0.20Down
Hindgut721 174 of 419.60Up
Heart13 14 of 4 0.38Down
Fat body145 1224 of 4 3.96None
Ovary2 11 of 4 0.10Down
Testis3 10 of 4 0.10Down
Male accessory glands5 10 of 4 0.10Down
Virgin spermatheca138 184 of 4 3.77Up
Mated spermatheca53 213 of 4 1.44None
Adult carcass104 124 of 4 2.80Up
Larval CNS151 334 of 4 4.12Up
Larval Salivary gland8 30 of 4 0.24Down
Larval midgut5 20 of 4 0.15Down
Larval tubule9 10 of 4 0.30Down
Larval hindgut328 524 of 4 8.91Up
Larval fat body185 254 of 4 5.00Up
Larval trachea0 00 of 4 0.01Down
Larval carcass13 20 of 4 0.36Down
S2 cells (growing)0 00 of 4 0.01Down
Whole fly36 74 of 4

Looking for FBgn0037167. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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