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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0037175 through 18771 annotations produced 1 hits


Annotation Number : CG14455
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037175
Gbrowse : chr3L:22679533-22680201 (-) // 100.0 //
Probeset : 1640851_at
Accessions : protein= NP_649402;, nucleotide= NM_141145;
FlyMine data for FBgn0037175.
VDRC has 2 RNAi stocks for FBgn0037175 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.50None
Head0 00 of 4 0.20None
Eye0 00 of 4 0.20None
Thoracicoabdominal ganglion1 00 of 4 0.30None
Salivary gland7 50 of 4 2.55None
Crop4 10 of 4 1.50None
Midgut4 10 of 4 1.50None
Tubule2 00 of 4 0.80None
Hindgut4 10 of 4 1.30None
Heart1 00 of 4 0.34None
Fat body3 30 of 4 1.02None
Ovary0 00 of 4 0.30None
Testis3 00 of 4 1.20None
Male accessory glands4 10 of 4 1.30None
Virgin spermatheca3 10 of 4 1.15None
Mated spermatheca1 00 of 4 0.33None
Adult carcass3 10 of 4 1.10None
Larval CNS1 20 of 4 0.60None
Larval Salivary gland2 10 of 4 0.80None
Larval midgut1 10 of 4 0.63None
Larval tubule3 20 of 4 1.10None
Larval hindgut1 00 of 4 0.49None
Larval fat body3 10 of 4 1.00None
Larval trachea1 10 of 4 0.54None
Larval carcass1 00 of 4 0.63None
S2 cells (growing)4 10 of 4 1.45None
Whole fly3 10 of 4

Looking for FBgn0037175. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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