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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0037176 through 18771 annotations produced 1 hits


Annotation Number : CG14456
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037176
Gbrowse : chr3L:22680470-22681293 (+) // 100.0 //
Probeset : 1636051_at
Accessions : protein= NP_001137998; /// NP_649403;, nucleotide= NM_001144526; /// NM_141146;
FlyMine data for FBgn0037176.
BioGrid reports that CG14456 interacts with CG3907 .
VDRC has 1 RNAi stocks for FBgn0037176 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head2 10 of 4 0.10Down
Eye1 10 of 4 0.08Down
Thoracicoabdominal ganglion1 00 of 4 0.10Down
Salivary gland2 10 of 4 0.10Down
Crop2 00 of 4 0.10Down
Midgut24 32 of 4 1.10None
Tubule1 00 of 4 0.10Down
Hindgut36 84 of 4 1.60None
Heart1 00 of 4 0.07Down
Fat body3 20 of 4 0.16Down
Ovary1 00 of 4 0.00Down
Testis252 34 of 411.30Up
Male accessory glands1 00 of 4 0.10Down
Virgin spermatheca21 132 of 4 0.94None
Mated spermatheca40 143 of 4 1.83None
Adult carcass2 10 of 4 0.10Down
Larval CNS0 00 of 4 0.02Down
Larval Salivary gland1 00 of 4 0.07Down
Larval midgut2 10 of 4 0.11Down
Larval tubule1 00 of 4 0.10Down
Larval hindgut0 00 of 4 0.03Down
Larval fat body29 131 of 4 1.30None
Larval trachea29 152 of 4 1.32None
Larval carcass7 30 of 4 0.34Down
S2 cells (growing)0 00 of 4 0.04Down
Whole fly22 14 of 4

Looking for FBgn0037176. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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