FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0037181 through 18771 annotations produced 1 hits

(CG11370):

Annotation Number : CG11370
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037181
Gbrowse : chr3L:22705256-22706763 (+) // 100.0 //
Probeset : 1625894_at
Accessions : protein= NP_649408;, nucleotide= NM_141151;
FlyMine data for FBgn0037181.
BDGP gene expression has embryonic in situ data for CG11370: 15 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0037181 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.80	None
Head	1 ± 0	0 of 4	1.80	None
Eye	673 ± 244	4 of 4	815.91	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.20	None
Salivary gland	3 ± 0	0 of 4	4.27	Up
Crop	0 ± 0	0 of 4	0.90	None
Midgut	1 ± 0	0 of 4	1.20	None
Tubule	1 ± 0	0 of 4	1.70	Up
Hindgut	0 ± 0	0 of 4	0.80	None
Heart	11 ± 8	1 of 4	13.73	None
Fat body	1 ± 0	0 of 4	1.76	None
Ovary	0 ± 0	0 of 4	0.50	None
Testis	1 ± 0	0 of 4	1.70	None
Male accessory glands	1 ± 0	0 of 4	1.20	None
Virgin spermatheca	1 ± 0	0 of 4	1.52	None
Mated spermatheca	1 ± 0	0 of 4	1.88	None
Adult carcass	2 ± 0	0 of 4	2.70	None
Larval CNS	347 ± 164	4 of 4	421.76	Up
Larval Salivary gland	152 ± 17	4 of 4	184.45	Up
Larval midgut	201 ± 40	4 of 4	243.79	Up
Larval tubule	1 ± 0	0 of 4	1.20	None
Larval hindgut	311 ± 21	4 of 4	377.30	Up
Larval fat body	1 ± 0	0 of 4	2.30	None
Larval trachea	6086 ± 532	4 of 4	7377.82	Up
Larval carcass	460 ± 86	4 of 4	557.67	Up
S2 cells (growing)	0 ± 0	0 of 4	1.18	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0037181. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720