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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037184 through 18771 annotations produced 1 hits



(CG14450):

Annotation Number : CG14450
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037184
Gbrowse : chr3L:22719332-22720879 (-) // 100.0 //
Probeset : 1623251_at
Accessions : protein= NP_649411;, nucleotide= NM_141154;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0037184.
BioGrid reports that CG14450 interacts with CG7135 .
VDRC has 1 RNAi stocks for FBgn0037184 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain144 ± 34 of 4 1.70Up
Head67 ± 34 of 4 0.80Down
Eye58 ± 14 of 4 0.69Down
Thoracicoabdominal ganglion127 ± 54 of 4 1.50Up
Salivary gland67 ± 54 of 4 0.80None
Crop71 ± 34 of 4 0.80None
Midgut64 ± 44 of 4 0.80Down
Tubule52 ± 24 of 4 0.60Down
Hindgut66 ± 44 of 4 0.80Down
Heart47 ± 24 of 4 0.56Down
Fat body49 ± 54 of 4 0.59Down
Ovary178 ± 44 of 4 2.10Up
Testis52 ± 44 of 4 0.60Down
Male accessory glands34 ± 14 of 4 0.40Down
Virgin spermatheca52 ± 54 of 4 0.62Down
Mated spermatheca44 ± 14 of 4 0.53Down
Adult carcass67 ± 54 of 4 0.80None
Larval CNS73 ± 34 of 4 0.86None
Larval Salivary gland65 ± 34 of 4 0.77Down
Larval midgut54 ± 24 of 4 0.64Down
Larval tubule61 ± 34 of 4 0.70Down
Larval hindgut58 ± 34 of 4 0.68Down
Larval fat body87 ± 54 of 4 1.00None
Larval trachea56 ± 34 of 4 0.67Down
Larval carcass62 ± 34 of 4 0.74Down
S2 cells (growing)70 ± 14 of 4 0.83None
Whole fly85 ± 54 of 4

Looking for FBgn0037184. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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