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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0037191 through 18771 annotations produced 1 hits



(CG14448):

Annotation Number : CG14448
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037191
Gbrowse : chr3L:22781538-22782353 (+) // 100.0 //
Probeset : 1636898_at
Accessions : protein= NP_649418;, nucleotide= NM_141161;
FlyMine data for FBgn0037191.
BDGP gene expression has embryonic in situ data for CG14448: 6 pix of staining in 1 body parts.
BioGrid reports that CG14448 interacts with CG9184 .
VDRC has 2 RNAi stocks for FBgn0037191 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.00Down
Head2 ± 10 of 4 0.00Down
Eye0 ± 00 of 4 0.01Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.10Down
Salivary gland5 ± 10 of 4 0.07Down
Crop4 ± 21 of 4 0.00Down
Midgut1 ± 00 of 4 0.00Down
Tubule4 ± 00 of 4 0.10Down
Hindgut3 ± 00 of 4 0.00Down
Heart0 ± 00 of 4 0.01Down
Fat body5 ± 20 of 4 0.06Down
Ovary2 ± 10 of 4 0.00Down
Testis1175 ± 614 of 413.60Up
Male accessory glands2 ± 10 of 4 0.00Down
Virgin spermatheca0 ± 00 of 4 0.01Down
Mated spermatheca6 ± 10 of 4 0.07Down
Adult carcass5 ± 30 of 4 0.10Down
Larval CNS3 ± 10 of 4 0.04Down
Larval Salivary gland3 ± 10 of 4 0.04Down
Larval midgut1 ± 10 of 4 0.02Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut4 ± 10 of 4 0.05Down
Larval fat body88 ± 444 of 4 1.00None
Larval trachea6 ± 51 of 4 0.07Down
Larval carcass3 ± 10 of 4 0.04Down
S2 cells (growing)2 ± 00 of 4 0.03Down
Whole fly86 ± 34 of 4

Looking for FBgn0037191. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime